The 2.0 version of rSNPBase

Variant report

Variant rs2989596
Chromosome Location chr13:30113375-30113376
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30071000-30128800 Strong transcription Dnd41 blood
2 chr13:30084200-30115800 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr13:30085800-30115400 Strong transcription Primary T cells from cord blood blood
4 chr13:30092200-30133000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr13:30095400-30114800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr13:30097200-30138400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr13:30098000-30117200 Weak transcription Small Intestine intestine
8 chr13:30098800-30129000 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr13:30099000-30114200 Weak transcription Fetal Heart heart
10 chr13:30102800-30113400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr13:30103800-30122200 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr13:30103800-30137200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr13:30104200-30135400 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr13:30104800-30124600 Weak transcription Right Ventricle heart
15 chr13:30105000-30120000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr13:30105000-30120200 Weak transcription Brain Substantia Nigra brain
17 chr13:30105200-30136800 Weak transcription Brain Germinal Matrix brain
18 chr13:30106600-30125400 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr13:30107000-30123200 Weak transcription K562 blood
20 chr13:30107200-30120600 Weak transcription Fetal Thymus thymus
21 chr13:30107200-30122200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr13:30107200-30123200 Weak transcription A549 lung
23 chr13:30107200-30124200 Weak transcription Placenta Placenta
24 chr13:30107400-30114800 Weak transcription Left Ventricle heart
25 chr13:30107400-30115000 Weak transcription Aorta Aorta
26 chr13:30107400-30122600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr13:30107400-30129200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr13:30107800-30114200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr13:30107800-30119800 Weak transcription Primary B cells from peripheral blood blood
30 chr13:30108000-30122600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr13:30108800-30114200 Weak transcription H9 Cell Line embryonic stem cell
32 chr13:30108800-30120000 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr13:30109800-30113400 Enhancers Duodenum Mucosa Duodenum
34 chr13:30110200-30113400 Weak transcription GM12878-XiMat blood
35 chr13:30110400-30113400 Weak transcription HepG2 liver
36 chr13:30110400-30113600 Enhancers HUVEC blood vessel
37 chr13:30110400-30114200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr13:30110400-30117400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr13:30110400-30120000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr13:30110400-30122200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr13:30110400-30123200 Weak transcription Lung lung
42 chr13:30110400-30123400 Weak transcription Spleen Spleen
43 chr13:30110400-30123400 Weak transcription NHLF lung
44 chr13:30110400-30124200 Weak transcription HMEC breast
45 chr13:30110400-30127200 Weak transcription Brain Angular Gyrus brain
46 chr13:30110600-30114000 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr13:30110600-30114200 Weak transcription NH-A brain
48 chr13:30110600-30114600 Weak transcription Thymus Thymus
49 chr13:30110600-30114600 Weak transcription HSMMtube muscle
50 chr13:30110600-30115000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015