The 2.0 version of rSNPBase

Variant report

Variant rs17073661
Chromosome Location chr13:30128986-30128987
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30092200-30133000 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr13:30097200-30138400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr13:30098800-30129000 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr13:30103800-30137200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr13:30104200-30135400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr13:30105200-30136800 Weak transcription Brain Germinal Matrix brain
7 chr13:30107400-30129200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr13:30112800-30129200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr13:30113200-30141600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr13:30113600-30129200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr13:30113800-30136200 Weak transcription Rectal Smooth Muscle rectum
12 chr13:30117800-30129000 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr13:30119400-30129200 Strong transcription NHEK skin
14 chr13:30121400-30130000 Weak transcription Adipose Nuclei Adipose
15 chr13:30122600-30129000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr13:30122600-30131600 Weak transcription Small Intestine intestine
17 chr13:30123000-30138600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr13:30123600-30136200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr13:30125000-30137200 Weak transcription Brain Anterior Caudate brain
20 chr13:30125000-30147400 Weak transcription A549 lung
21 chr13:30125800-30130800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr13:30125800-30136600 Weak transcription Brain Hippocampus Middle brain
23 chr13:30125800-30142200 Weak transcription K562 blood
24 chr13:30125800-30143200 Weak transcription Gastric stomach
25 chr13:30126000-30135800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr13:30126000-30137000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr13:30126000-30138400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr13:30126000-30161400 Weak transcription Primary B cells from cord blood blood
29 chr13:30126200-30130600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr13:30126200-30137200 Weak transcription H9 Cell Line embryonic stem cell
31 chr13:30126200-30147200 Weak transcription Spleen Spleen
32 chr13:30126600-30136000 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr13:30126600-30136000 Weak transcription HUVEC blood vessel
34 chr13:30126800-30135200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr13:30127400-30129200 Weak transcription Primary B cells from peripheral blood blood
36 chr13:30127400-30142200 Weak transcription Placenta Amnion Placenta Amnion
37 chr13:30127600-30135400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr13:30127600-30135800 Weak transcription HSMM muscle
39 chr13:30127600-30137200 Weak transcription Brain Cingulate Gyrus brain
40 chr13:30127600-30137800 Weak transcription Stomach Smooth Muscle stomach
41 chr13:30127600-30144000 Weak transcription Fetal Intestine Small intestine
42 chr13:30127600-30146200 Weak transcription Right Ventricle heart
43 chr13:30127600-30151400 Weak transcription Aorta Aorta
44 chr13:30127600-30156400 Weak transcription Lung lung
45 chr13:30127800-30129400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr13:30127800-30129600 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr13:30127800-30130600 Weak transcription NH-A brain
48 chr13:30127800-30131000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr13:30127800-30131000 Weak transcription Fetal Brain Female brain
50 chr13:30127800-30135800 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015