The 2.0 version of rSNPBase

Variant report

Variant rs2991267
Chromosome Location chr1:56840968-56840969
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56837200-56842200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:56837200-56842400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:56839000-56845000 Enhancers Fetal Muscle Leg muscle
4 chr1:56839200-56842800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:56839200-56846800 Enhancers Fetal Stomach stomach
6 chr1:56839400-56841200 Enhancers Fetal Intestine Small intestine
7 chr1:56839400-56842600 Enhancers NHDF-Ad bronchial
8 chr1:56839400-56842800 Enhancers Muscle Satellite Cultured Cells --
9 chr1:56839400-56843000 Enhancers Adipose Nuclei Adipose
10 chr1:56839400-56844600 Enhancers Fetal Lung lung
11 chr1:56839400-56844800 Enhancers Rectal Smooth Muscle rectum
12 chr1:56839600-56842600 Enhancers HSMM muscle
13 chr1:56839600-56842600 Enhancers HSMMtube muscle
14 chr1:56839600-56842800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:56839600-56843800 Enhancers Duodenum Smooth Muscle Duodenum
16 chr1:56839600-56844200 Enhancers Cortex derived primary cultured neurospheres brain
17 chr1:56839600-56844800 Enhancers Colon Smooth Muscle Colon
18 chr1:56839800-56841000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:56839800-56841200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:56839800-56841200 Enhancers Fetal Intestine Large intestine
21 chr1:56839800-56841200 Enhancers Right Ventricle heart
22 chr1:56839800-56841400 Enhancers Aorta Aorta
23 chr1:56839800-56841600 Enhancers Left Ventricle heart
24 chr1:56839800-56842600 Enhancers NH-A brain
25 chr1:56839800-56843800 Enhancers H1 Cell Line embryonic stem cell
26 chr1:56839800-56844600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr1:56840000-56842200 Enhancers HUES6 Cell Line embryonic stem cell
28 chr1:56840000-56842200 Enhancers Stomach Smooth Muscle stomach
29 chr1:56840000-56843400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:56840000-56843800 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr1:56840000-56844800 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr1:56840000-56862400 Weak transcription Gastric stomach
33 chr1:56840200-56841600 Enhancers Fetal Thymus thymus
34 chr1:56840200-56842000 Weak transcription Brain Cingulate Gyrus brain
35 chr1:56840200-56842200 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr1:56840200-56842400 Weak transcription Lung lung
37 chr1:56840200-56842400 Enhancers A549 lung
38 chr1:56840200-56842800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:56840200-56843400 Weak transcription Colonic Mucosa Colon
40 chr1:56840200-56843600 Enhancers HUES64 Cell Line embryonic stem cell
41 chr1:56840200-56843600 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr1:56840200-56844400 Enhancers Fetal Heart heart
43 chr1:56840200-56845000 Enhancers Brain Germinal Matrix brain
44 chr1:56840400-56841400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:56840400-56841600 Enhancers Psoas Muscle Psoas
46 chr1:56840400-56841800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:56840400-56842000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:56840400-56842200 Enhancers HMEC breast
49 chr1:56840400-56842400 Weak transcription Brain Substantia Nigra brain
50 chr1:56840400-56842600 Enhancers Osteobl bone

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015