Variant report

Variant	rs2992835
Chromosome Location	chr9:272981-272982
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TBL1XR1	chr9:271793-273213	K562	blood:	n/a	n/a
2	GTF2B	chr9:272807-273139	K562	blood:	n/a	n/a
3	PML	chr9:272620-273406	GM12878	blood:	n/a	n/a
4	POLR2A	chr9:272642-273150	GM12891	blood:	n/a	n/a
5	YY1	chr9:272734-273294	K562	blood:	n/a	chr9:273040-273060
6	RUNX3	chr9:272647-273222	GM12878	blood:	n/a	n/a
7	ATF2	chr9:272677-273240	GM12878	blood:	n/a	n/a
8	TAF1	chr9:272688-273277	GM12878	blood:	n/a	n/a
9	POLR2A	chr9:272557-273265	GM12892	blood:	n/a	n/a
10	REST	chr9:272666-273265	HL-60	blood:	n/a	n/a
11	POLR2A	chr9:272673-273253	Raji	blood:	n/a	n/a
12	WRNIP1	chr9:272749-273145	GM12878	blood:	n/a	n/a
13	POLR2A	chr9:272630-273314	GM18505	blood:	n/a	n/a
14	YY1	chr9:272740-273219	GM12878	blood:	n/a	chr9:273040-273060
15	ATF1	chr9:272781-273161	K562	blood:	n/a	n/a
16	YY1	chr9:272780-273104	GM12891	blood:	n/a	chr9:273040-273060
17	REST	chr9:272767-272992	Hela-S3	cervix:	n/a	n/a
18	CEBPB	chr9:272749-273224	K562	blood:	n/a	chr9:273149-273160
19	POLR2A	chr9:272638-273220	GM12891	blood:	n/a	n/a
20	EP300	chr9:272025-273608	K562	blood:	n/a	chr9:272862-272876 chr9:272707-272716
21	POLR2A	chr9:272620-273136	K562	blood:	n/a	n/a
22	PML	chr9:272722-273133	K562	blood:	n/a	n/a
23	YY1	chr9:272724-273354	GM12878	blood:	n/a	chr9:273040-273060
24	RCOR1	chr9:272132-273092	K562	blood:	n/a	n/a
25	GABPA	chr9:272747-273343	HL-60	blood:	n/a	n/a
26	ETS1	chr9:272728-273257	GM12878	blood:	n/a	chr9:272862-272877 chr9:272866-272873 chr9:272862-272873
27	POU2F2	chr9:272762-273058	GM12891	blood:	n/a	chr9:272855-272868 chr9:272856-272870 chr9:272853-272867
28	POLR2A	chr9:272354-273327	GM19099	blood:	n/a	n/a
29	TEAD4	chr9:272718-273190	K562	blood:	n/a	n/a
30	NFIC	chr9:272639-273226	GM12878	blood:	n/a	n/a
31	ATF2	chr9:272650-273286	GM12878	blood:	n/a	n/a
32	BCLAF1	chr9:272658-273387	GM12878	blood:	n/a	chr9:272862-272871
33	STAT5A	chr9:272646-273190	GM12878	blood:	n/a	n/a
34	MYC	chr9:272147-273213	K562	blood:	n/a	n/a
35	POLR2A	chr9:272603-273290	GM12892	blood:	n/a	n/a
36	TAL1	chr9:272804-273082	K562	blood:	n/a	n/a
37	UBTF	chr9:272873-273179	K562	blood:	n/a	n/a
38	POLR2A	chr9:272648-273219	GM12891	blood:	n/a	n/a
39	ELF1	chr9:272793-273103	K562	blood:	n/a	chr9:272901-272914
40	NFIC	chr9:272669-273269	GM12878	blood:	n/a	n/a
41	PML	chr9:272733-273160	GM12878	blood:	n/a	n/a
42	SPI1	chr9:272671-273101	GM12878	blood:	n/a	chr9:272867-272874
43	POLR2A	chr9:272792-273029	K562	blood:	n/a	n/a
44	POLR2A	chr9:272735-273182	GM12878	blood:	n/a	n/a
45	KAP1	chr9:271932-273434	K562	blood:	n/a	n/a
46	POLR2A	chr9:272723-273145	HL-60	blood:	n/a	n/a
47	POLR2A	chr9:272290-273329	GM12878	blood:	n/a	n/a
48	SPI1	chr9:272603-273150	HL-60	blood:	n/a	chr9:272867-272874
49	IRF1	chr9:272795-273281	K562	blood:	n/a	chr9:272863-272872
50	POLR2A	chr9:272133-273227	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:212545..218648-chr9:270340..281940,20	K562	blood:
2	chr9:213589..216422-chr9:270983..274599,7	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf66-1	chr9:272905-273002	ENSG00000235880.1

Variant related genes	Relation type
DOCK8	TF binding region
ENSG00000183784	Chromatin interaction
ENSG00000107099	Chromatin interaction

Extended variants
information (count: 237 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10812374	0.85[JPT][hapmap]
rs10967209	0.85[JPT][hapmap]
rs2274526	0.80[JPT][hapmap]
rs9792501	0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:233 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949672	chr9:13091-274606	Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
2	nsv948701	chr9:13091-499586	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
3	nsv949346	chr9:13091-776349	Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
4	esv2758174	chr9:31994-383816	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	esv2759654	chr9:31994-383816	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv612981	chr9:39037-290841	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
7	esv2752301	chr9:40910-274606	Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
8	esv2752302	chr9:40910-274606	Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
9	esv2752303	chr9:40910-277989	Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
10	nsv429974	chr9:40910-289061	Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
11	esv34714	chr9:40910-317370	Strong transcription Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
12	esv2752304	chr9:40910-409398	Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
13	nsv948375	chr9:40910-439102	Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
14	esv2764172	chr9:40910-593899	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
15	nsv949051	chr9:40910-925305	Bivalent Enhancer Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
16	esv2752306	chr9:46431-499586	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
17	nsv1015933	chr9:46587-289419	Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
18	nsv1026546	chr9:46587-290670	Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
19	nsv1032144	chr9:46587-292002	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
20	nsv1033678	chr9:46587-319961	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
21	nsv1033923	chr9:46587-322795	ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
22	nsv1015879	chr9:46587-360382	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
23	nsv1021015	chr9:46587-370439	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
24	nsv1034651	chr9:46587-399040	Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
25	nsv515505	chr9:46587-449700	Enhancers Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
26	nsv1024015	chr9:46587-449798	Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
27	nsv1033067	chr9:46587-499586	Bivalent Enhancer Strong transcription Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
28	nsv1018439	chr9:46587-518103	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
29	nsv530903	chr9:52389-356138	Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
30	esv2757299	chr9:57964-362209	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
31	nsv8403	chr9:62805-324255	Genic enhancers Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
32	nsv1023234	chr9:88018-309054	Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
33	nsv1033689	chr9:88018-358384	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
34	nsv1015260	chr9:101857-348466	Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
35	nsv612984	chr9:108998-318153	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
36	nsv1029333	chr9:110685-495126	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
37	nsv612985	chr9:112542-358932	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
38	nsv1015468	chr9:115889-273160	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
39	nsv1022969	chr9:199707-273651	Genic enhancers Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
40	nsv891947	chr9:199707-274433	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
41	nsv442127	chr9:199707-274606	Genic enhancers Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
42	nsv891948	chr9:199707-279149	Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
43	nsv891949	chr9:199707-281976	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
44	nsv1018435	chr9:199707-297866	Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
45	nsv891951	chr9:199707-303639	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
46	nsv1025382	chr9:199707-309054	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
47	nsv1024500	chr9:199707-332639	Active TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
48	nsv891952	chr9:199707-335545	Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
49	nsv1021696	chr9:199707-336687	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
50	nsv1022226	chr9:199707-337422	Enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:266000-281600	Weak transcription	Adipose Nuclei	Adipose
2	chr9:268800-280400	Weak transcription	Psoas Muscle	Psoas
3	chr9:268800-282200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr9:268800-294400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr9:268800-337200	Weak transcription	Gastric	stomach
6	chr9:269200-273000	Weak transcription	Duodenum Mucosa	Duodenum
7	chr9:269200-280400	Weak transcription	Placenta	Placenta
8	chr9:269400-273000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr9:269600-273000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
10	chr9:269600-275000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
11	chr9:270600-312600	Weak transcription	Fetal Intestine Large	intestine
12	chr9:270800-293000	Weak transcription	Lung	lung
13	chr9:271000-278400	Weak transcription	Spleen	Spleen
14	chr9:271000-296800	Weak transcription	Esophagus	oesophagus
15	chr9:271200-273000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
16	chr9:271400-273000	Enhancers	Primary B cells from peripheral blood	blood
17	chr9:271800-273000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr9:271800-273000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
19	chr9:271800-273000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
20	chr9:271800-282200	Weak transcription	Small Intestine	intestine
21	chr9:272200-273000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
22	chr9:272400-273000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
23	chr9:272400-273000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
24	chr9:272400-273000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
25	chr9:272400-274800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
26	chr9:272400-278600	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr9:272600-273000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
28	chr9:272600-273000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
29	chr9:272600-273000	Flanking Active TSS	Fetal Thymus	thymus
30	chr9:272600-273000	Flanking Active TSS	Dnd41	blood
31	chr9:272600-273000	Flanking Active TSS	GM12878-XiMat	blood
32	chr9:272600-274200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
33	chr9:272600-274200	Active TSS	Primary T cells from cord blood	blood
34	chr9:272600-275000	Active TSS	Primary T regulatory cells fromperipheralblood	blood
35	chr9:272600-275200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr9:272600-275400	Active TSS	Rectal Mucosa Donor 29	rectum
37	chr9:272800-273000	Flanking Active TSS	K562	blood
38	chr9:272800-273200	Active TSS	Primary hematopoietic stem cells	blood
39	chr9:272800-273200	Active TSS	Primary hematopoietic stem cells short term culture	blood
40	chr9:272800-273200	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr9:272800-273400	Active TSS	Primary B cells from cord blood	blood
42	chr9:272800-274200	Active TSS	Thymus	Thymus
43	chr9:272800-274400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
44	chr9:272800-274800	Active TSS	Primary T killer memory cells from peripheral blood	blood
45	chr9:272800-275200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr9:272800-280400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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