Variant report

Variant	rs3010341
Chromosome Location	chr6:114056023-114056024
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:114048463..114050659-chr6:114053494..114056179,2	K562	blood:

rs_ID	r²[population]
rs10499075	0.87[EUR][1000 genomes]
rs17052544	0.91[EUR][1000 genomes]
rs17075386	0.91[EUR][1000 genomes]
rs17184188	0.91[EUR][1000 genomes]
rs2498744	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2498745	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35568516	1.00[EUR][1000 genomes]
rs4945972	0.87[EUR][1000 genomes]
rs61506350	1.00[EUR][1000 genomes]
rs6901982	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72954659	0.87[EUR][1000 genomes]
rs72954689	0.87[EUR][1000 genomes]
rs72954700	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72956702	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114053600-114056200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:114054000-114056200	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr6:114054000-114063200	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr6:114054200-114056200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr6:114054200-114056200	Weak transcription	Stomach Mucosa	stomach
6	chr6:114054200-114058200	Weak transcription	HepG2	liver
7	chr6:114054400-114056200	Weak transcription	Brain Anterior Caudate	brain
8	chr6:114054400-114056200	Weak transcription	HSMM	muscle
9	chr6:114054400-114056400	Weak transcription	HSMMtube	muscle
10	chr6:114055200-114056200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr6:114055800-114057000	Enhancers	Primary neutrophils fromperipheralblood	blood
12	chr6:114055800-114057600	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr6:114056000-114056200	Enhancers	Left Ventricle	heart
14	chr6:114056000-114056200	Enhancers	Psoas Muscle	Psoas
15	chr6:114056000-114056400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:114056000-114056400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr6:114056000-114056400	Enhancers	Right Atrium	heart
18	chr6:114056000-114056600	Enhancers	HMEC	breast
19	chr6:114056000-114056600	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr6:114056000-114056600	Enhancers	NH-A	brain
21	chr6:114056000-114056600	Enhancers	NHEK	skin
22	chr6:114056000-114056800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr6:114056000-114057000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr6:114056000-114057000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr6:114056000-114057000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr6:114056000-114057000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr6:114056000-114057000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr6:114056000-114057000	Enhancers	Cortex derived primary cultured neurospheres	brain
29	chr6:114056000-114057000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr6:114056000-114057000	Enhancers	Brain Hippocampus Middle	brain
31	chr6:114056000-114057000	Enhancers	Fetal Muscle Leg	muscle
32	chr6:114056000-114057000	Enhancers	Rectal Smooth Muscle	rectum
33	chr6:114056000-114057000	Enhancers	NHDF-Ad	bronchial
34	chr6:114056000-114057000	Enhancers	Osteobl	bone
35	chr6:114056000-114057400	Enhancers	Primary hematopoietic stem cells short term culture	blood

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