Variant report

Variant	rs6901982
Chromosome Location	chr6:114052981-114052982
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:114051176..114053863-chr6:114061498..114063404,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1026641	1.00[ASN][1000 genomes]
rs10499075	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17052544	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17075355	1.00[ASN][1000 genomes]
rs17075374	1.00[ASN][1000 genomes]
rs17075386	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17184188	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2498744	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2498745	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3010341	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35568516	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4945972	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55884650	1.00[ASN][1000 genomes]
rs55938064	1.00[ASN][1000 genomes]
rs61506350	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72942612	1.00[ASN][1000 genomes]
rs72944607	1.00[ASN][1000 genomes]
rs72944627	1.00[ASN][1000 genomes]
rs72944632	1.00[ASN][1000 genomes]
rs72944642	1.00[ASN][1000 genomes]
rs72944645	1.00[ASN][1000 genomes]
rs72954652	1.00[ASN][1000 genomes]
rs72954659	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72954689	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72954700	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72956702	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72960753	1.00[ASN][1000 genomes]
rs72960758	1.00[ASN][1000 genomes]
rs72960763	1.00[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114044800-114053600	Weak transcription	Fetal Lung	lung
2	chr6:114045000-114053400	Weak transcription	Stomach Mucosa	stomach
3	chr6:114048400-114053600	Weak transcription	Pancreas	Pancrea
4	chr6:114049400-114053600	Weak transcription	Fetal Kidney	kidney
5	chr6:114049400-114053800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:114050800-114053600	Weak transcription	Psoas Muscle	Psoas
7	chr6:114052200-114054000	Enhancers	Rectal Mucosa Donor 31	rectum
8	chr6:114052200-114055000	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr6:114052200-114055000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr6:114052400-114053600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr6:114052600-114053400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr6:114052600-114053400	Enhancers	Fetal Muscle Leg	muscle
13	chr6:114052600-114053600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr6:114052800-114053200	Enhancers	Rectal Smooth Muscle	rectum
15	chr6:114052800-114053400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr6:114052800-114054000	Enhancers	Fetal Heart	heart
17	chr6:114052800-114054000	Enhancers	Right Atrium	heart

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