The 2.0 version of rSNPBase

Variant report

Variant rs3025825
Chromosome Location chr4:3210456-3210457
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3114600-3292400 Weak transcription Right Atrium heart
2 chr4:3145800-3239200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr4:3172400-3238800 Strong transcription HUES64 Cell Line embryonic stem cell
4 chr4:3191800-3211600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr4:3193800-3233000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr4:3194000-3237600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr4:3194200-3210600 Weak transcription HMEC breast
8 chr4:3194200-3212600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr4:3196000-3242600 Strong transcription Fetal Intestine Small intestine
10 chr4:3201400-3238400 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr4:3203800-3211600 Weak transcription Fetal Heart heart
12 chr4:3204800-3210800 Weak transcription Small Intestine intestine
13 chr4:3204800-3246000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr4:3205000-3213600 Weak transcription Psoas Muscle Psoas
15 chr4:3205200-3212200 Strong transcription GM12878-XiMat blood
16 chr4:3205400-3212600 Strong transcription Dnd41 blood
17 chr4:3205400-3224800 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr4:3205600-3216600 Weak transcription Hela-S3 cervix
19 chr4:3205800-3228000 Strong transcription Left Ventricle heart
20 chr4:3206000-3210600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr4:3206000-3220400 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr4:3206000-3234800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr4:3206000-3244600 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr4:3206000-3246400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr4:3206400-3229600 Strong transcription Fetal Stomach stomach
26 chr4:3206600-3210600 Weak transcription Fetal Brain Male brain
27 chr4:3206800-3221600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr4:3207200-3229000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr4:3207600-3211200 Strong transcription Thymus Thymus
30 chr4:3207600-3221000 Strong transcription Primary T cells fromperipheralblood blood
31 chr4:3207600-3238600 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr4:3207600-3243600 Strong transcription Primary B cells from peripheral blood blood
33 chr4:3207600-3244000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr4:3207600-3244600 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr4:3207600-3245400 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr4:3207600-3246400 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr4:3207800-3210600 Strong transcription Gastric stomach
38 chr4:3207800-3212000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
39 chr4:3207800-3212400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr4:3207800-3212400 Strong transcription Brain Substantia Nigra brain
41 chr4:3207800-3212400 Strong transcription NHLF lung
42 chr4:3207800-3212600 Strong transcription iPS-15b Cell Line embryonic stem cell
43 chr4:3207800-3212600 Strong transcription Brain Angular Gyrus brain
44 chr4:3207800-3212600 Strong transcription Rectal Smooth Muscle rectum
45 chr4:3207800-3219400 Strong transcription HSMM muscle
46 chr4:3207800-3221400 Strong transcription Skeletal Muscle Male skeletal muscle
47 chr4:3207800-3221600 Strong transcription Fetal Muscle Trunk muscle
48 chr4:3207800-3221600 Strong transcription Fetal Muscle Leg muscle
49 chr4:3207800-3226400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr4:3207800-3226600 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015