Variant report

Variant rs3086
Chromosome Location chr1:174136374-174136375
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174129600-174164800 Weak transcription Gastric stomach
2 chr1:174129600-174173200 Weak transcription Pancreas Pancrea
3 chr1:174129800-174137000 Weak transcription Fetal Lung lung
4 chr1:174129800-174145600 Weak transcription Fetal Thymus thymus
5 chr1:174129800-174147000 Weak transcription Fetal Brain Male brain
6 chr1:174129800-174149600 Weak transcription Aorta Aorta
7 chr1:174130000-174144400 Weak transcription Primary hematopoietic stem cells blood
8 chr1:174130000-174157600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:174130200-174138000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:174130200-174143200 Weak transcription Primary B cells from cord blood blood
11 chr1:174130200-174145000 Weak transcription NHEK skin
12 chr1:174130200-174145600 Weak transcription Fetal Stomach stomach
13 chr1:174130200-174147400 Weak transcription Hela-S3 cervix
14 chr1:174130800-174138200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:174130800-174156600 Weak transcription Primary T cells from cord blood blood
16 chr1:174131200-174138800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:174131400-174136600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:174132600-174136600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr1:174132600-174138400 Weak transcription Right Atrium heart
20 chr1:174133000-174140600 Enhancers Fetal Heart heart
21 chr1:174134000-174136800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr1:174134000-174139600 Enhancers Primary B cells from peripheral blood blood
23 chr1:174134200-174143600 Weak transcription Fetal Intestine Large intestine
24 chr1:174134600-174136600 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr1:174134800-174136400 Enhancers Liver Liver
26 chr1:174134800-174137200 Enhancers Primary T regulatory cells fromperipheralblood blood
27 chr1:174134800-174159800 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:174135000-174136400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:174135000-174136800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr1:174135000-174136800 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr1:174135000-174138400 Weak transcription Left Ventricle heart
32 chr1:174135200-174136400 Active TSS Pancreatic Islets Pancreatic Islet
33 chr1:174135200-174137000 Weak transcription Primary T cells fromperipheralblood blood
34 chr1:174135200-174138600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr1:174135200-174139000 Weak transcription HepG2 liver
36 chr1:174135200-174143200 Weak transcription Duodenum Mucosa Duodenum
37 chr1:174135400-174136400 Enhancers Primary monocytes fromperipheralblood blood
38 chr1:174135400-174136400 Enhancers Skeletal Muscle Male skeletal muscle
39 chr1:174135400-174136800 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr1:174135600-174136400 Enhancers Small Intestine intestine
41 chr1:174135600-174137200 Flanking Active TSS GM12878-XiMat blood
42 chr1:174135800-174136600 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr1:174135800-174136600 Flanking Active TSS K562 blood
44 chr1:174135800-174143800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr1:174136000-174142800 Weak transcription Fetal Intestine Small intestine
46 chr1:174136200-174136400 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr1:174136200-174136600 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr1:174136200-174141600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr1:174136200-174150800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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