Variant report

Variant rs3097714
Chromosome Location chr2:38960491-38960492
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:38894400-38960600 Weak transcription Brain Substantia Nigra brain
2 chr2:38909400-38960600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr2:38928800-38971600 Weak transcription Small Intestine intestine
4 chr2:38930600-38965000 Weak transcription Gastric stomach
5 chr2:38936400-38960600 Weak transcription H9 Cell Line embryonic stem cell
6 chr2:38936400-38968400 Weak transcription Colonic Mucosa Colon
7 chr2:38937600-38970400 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:38948200-38968200 Weak transcription Stomach Mucosa stomach
9 chr2:38948400-38964400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr2:38948400-38964600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:38948400-38970600 Weak transcription NHEK skin
12 chr2:38948600-38970200 Weak transcription NHDF-Ad bronchial
13 chr2:38948600-38971200 Weak transcription Fetal Kidney kidney
14 chr2:38948800-38960600 Weak transcription Brain Angular Gyrus brain
15 chr2:38948800-38964600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr2:38949000-38965000 Weak transcription Right Ventricle heart
17 chr2:38950000-38964600 Weak transcription HUVEC blood vessel
18 chr2:38950200-38970400 Weak transcription Right Atrium heart
19 chr2:38950400-38970400 Weak transcription Psoas Muscle Psoas
20 chr2:38950400-38973600 Weak transcription Fetal Brain Male brain
21 chr2:38950600-38960600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr2:38950800-38964400 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr2:38950800-38964600 Weak transcription Primary hematopoietic stem cells blood
24 chr2:38950800-38965000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr2:38950800-38969600 Weak transcription Muscle Satellite Cultured Cells --
26 chr2:38950800-38972200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr2:38951000-38970600 Weak transcription Fetal Heart heart
28 chr2:38953200-38964600 Weak transcription K562 blood
29 chr2:38954000-38964400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr2:38955800-38961400 Strong transcription Fetal Intestine Large intestine
31 chr2:38956000-38961200 Strong transcription Duodenum Mucosa Duodenum
32 chr2:38956000-38961800 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr2:38956000-38962400 Strong transcription Primary T cells from cord blood blood
34 chr2:38956000-38962400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:38956000-38962600 Strong transcription Primary T cells fromperipheralblood blood
36 chr2:38956000-38962600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr2:38956000-38962800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr2:38956400-38962000 Strong transcription Fetal Intestine Small intestine
39 chr2:38956400-38962600 Strong transcription Fetal Stomach stomach
40 chr2:38956400-38963200 Strong transcription Thymus Thymus
41 chr2:38956600-38960800 Strong transcription Adipose Nuclei Adipose
42 chr2:38956600-38961000 Strong transcription Stomach Smooth Muscle stomach
43 chr2:38956600-38961200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr2:38956600-38961200 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr2:38956600-38961400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr2:38956600-38962400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:38956600-38962400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:38956600-38962400 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr2:38956600-38962600 Strong transcription HUES6 Cell Line embryonic stem cell
50 chr2:38956600-38962600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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