Variant report

Variant rs3115570
Chromosome Location chr6:32222706-32222707
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32220200-32222800 Enhancers HUVEC blood vessel
2 chr6:32220600-32222800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr6:32220600-32222800 Weak transcription NHEK skin
4 chr6:32220800-32222800 Weak transcription Primary hematopoietic stem cells blood
5 chr6:32220800-32222800 Weak transcription GM12878-XiMat blood
6 chr6:32220800-32223000 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr6:32221000-32223200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr6:32221000-32223200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr6:32222200-32222800 Enhancers Primary T helper cells PMA-I stimulated --
10 chr6:32222200-32222800 Active TSS Stomach Smooth Muscle stomach
11 chr6:32222200-32222800 Enhancers K562 blood
12 chr6:32222200-32223200 Active TSS H1 Cell Line embryonic stem cell
13 chr6:32222200-32223200 Active TSS HUES6 Cell Line embryonic stem cell
14 chr6:32222200-32223200 Enhancers Primary T cells from cord blood blood
15 chr6:32222200-32223200 Active TSS Brain Anterior Caudate brain
16 chr6:32222200-32223200 Active TSS Brain Cingulate Gyrus brain
17 chr6:32222200-32223200 Active TSS Fetal Stomach stomach
18 chr6:32222200-32223400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr6:32222200-32223400 Active TSS Breast Myoepithelial Primary Cells Breast
20 chr6:32222200-32223400 Active TSS Brain Inferior Temporal Lobe brain
21 chr6:32222200-32223400 Active TSS Fetal Lung lung
22 chr6:32222200-32223600 Active TSS Brain Angular Gyrus brain
23 chr6:32222200-32224200 Active TSS ES-I3 Cell Line embryonic stem cell
24 chr6:32222200-32224200 Active TSS Brain Germinal Matrix brain
25 chr6:32222200-32224400 Active TSS Fetal Kidney kidney
26 chr6:32222200-32224800 Active TSS Fetal Brain Female brain
27 chr6:32222400-32222800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr6:32222400-32222800 Enhancers Primary B cells from peripheral blood blood
29 chr6:32222400-32222800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr6:32222400-32222800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:32222400-32222800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr6:32222400-32223000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr6:32222400-32223000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr6:32222400-32223200 Active TSS H9 Cell Line embryonic stem cell
35 chr6:32222400-32223200 Active TSS HUES48 Cell Line embryonic stem cell
36 chr6:32222400-32223200 Active TSS iPS-18 Cell Line embryonic stem cell
37 chr6:32222400-32223200 Active TSS iPS-20b Cell Line embryonic stem cell
38 chr6:32222400-32223200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
39 chr6:32222400-32223200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
40 chr6:32222400-32223200 Active TSS Brain Substantia Nigra brain
41 chr6:32222400-32223200 Active TSS Duodenum Smooth Muscle Duodenum
42 chr6:32222400-32223200 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
43 chr6:32222400-32223400 Active TSS Aorta Aorta
44 chr6:32222400-32223800 Flanking Active TSS Fetal Muscle Leg muscle
45 chr6:32222400-32224000 Flanking Active TSS Fetal Brain Male brain
46 chr6:32222600-32222800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr6:32222600-32222800 Enhancers Primary T helper cells fromperipheralblood blood
48 chr6:32222600-32222800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr6:32222600-32222800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
50 chr6:32222600-32222800 Active TSS Left Ventricle heart

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