Variant report

Variant	rs3120913
Chromosome Location	chrX:93964085-93964086
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519792	chrX:93612806-94244221	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv534627	chrX:93622826-94376002	Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
3	nsv917259	chrX:93842873-94018582	Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv3432845	chrX:93963606-94052623	Weak transcription Genic enhancers Enhancers Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:93959800-93984800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chrX:93961200-93969800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
3	chrX:93961600-93964600	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
4	chrX:93961600-93965800	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
5	chrX:93961600-93968400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
6	chrX:93961600-93969800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
7	chrX:93961800-93964400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
8	chrX:93961800-93965000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
9	chrX:93963600-93964800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
10	chrX:93963800-93965400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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