The 2.0 version of rSNPBase

Variant report

Variant rs3123520
Chromosome Location chr9:140541918-140541919
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140516200-140558800 Weak transcription NH-A brain
2 chr9:140520000-140549800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr9:140523400-140563400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr9:140526600-140557800 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr9:140527400-140543000 Weak transcription K562 blood
6 chr9:140527400-140557600 Weak transcription Fetal Kidney kidney
7 chr9:140527600-140544800 Weak transcription HSMM muscle
8 chr9:140527600-140547600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr9:140527600-140549800 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr9:140527600-140551400 Weak transcription Pancreas Pancrea
11 chr9:140527600-140563800 Weak transcription Aorta Aorta
12 chr9:140527800-140559200 Weak transcription Brain Hippocampus Middle brain
13 chr9:140528000-140542800 Weak transcription Muscle Satellite Cultured Cells --
14 chr9:140528000-140560600 Weak transcription HUVEC blood vessel
15 chr9:140528200-140550000 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr9:140528400-140545400 Weak transcription H1 Cell Line embryonic stem cell
17 chr9:140531000-140564800 Weak transcription Placenta Amnion Placenta Amnion
18 chr9:140533400-140559400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr9:140534000-140544000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr9:140534200-140559800 Weak transcription NHLF lung
21 chr9:140534400-140542400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr9:140534400-140543000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr9:140534400-140544000 Weak transcription Stomach Mucosa stomach
24 chr9:140534400-140545400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr9:140534400-140555000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr9:140534400-140559200 Weak transcription Colon Smooth Muscle Colon
27 chr9:140534400-140563400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr9:140534600-140545400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr9:140534600-140545400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr9:140534600-140551200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr9:140534600-140551600 Weak transcription Right Atrium heart
32 chr9:140534600-140560400 Weak transcription Colonic Mucosa Colon
33 chr9:140534600-140572600 Weak transcription Small Intestine intestine
34 chr9:140535200-140553000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr9:140535400-140544400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr9:140535600-140553000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr9:140535600-140559000 Weak transcription Fetal Brain Male brain
38 chr9:140536000-140551800 Strong transcription Fetal Intestine Small intestine
39 chr9:140536200-140542000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr9:140536200-140545200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr9:140537400-140544800 Weak transcription HepG2 liver
42 chr9:140537600-140559000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr9:140538200-140543000 Strong transcription NHEK skin
44 chr9:140538200-140549000 Weak transcription Ovary ovary
45 chr9:140538800-140544800 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr9:140538800-140545400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr9:140538800-140547800 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr9:140538800-140549800 Weak transcription Dnd41 blood
49 chr9:140538800-140552400 Weak transcription HSMMtube muscle
50 chr9:140538800-140559800 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015