Variant report

Variant rs3129316
Chromosome Location chr4:3287906-3287907
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3286200-3292200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr4:3286800-3290600 Enhancers Fetal Brain Male brain
3 chr4:3287000-3288600 Enhancers Spleen Spleen
4 chr4:3287000-3288600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr4:3287000-3290200 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr4:3287000-3290800 Bivalent Enhancer Fetal Muscle Trunk muscle
7 chr4:3287200-3288400 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr4:3287200-3288600 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr4:3287200-3288800 Enhancers HMEC breast
10 chr4:3287200-3289000 Enhancers Primary hematopoietic stem cells blood
11 chr4:3287200-3289600 Bivalent Enhancer Fetal Stomach stomach
12 chr4:3287400-3288200 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
13 chr4:3287400-3288600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr4:3287400-3288800 Enhancers Primary B cells from cord blood blood
15 chr4:3287600-3288000 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
16 chr4:3287600-3288000 Flanking Active TSS Primary monocytes fromperipheralblood blood
17 chr4:3287600-3288000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr4:3287600-3288000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr4:3287600-3288000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
20 chr4:3287600-3288000 Bivalent Enhancer Rectal Mucosa Donor 31 rectum
21 chr4:3287600-3288000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
22 chr4:3287600-3288000 Flanking Active TSS NHDF-Ad bronchial
23 chr4:3287600-3288200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
24 chr4:3287600-3288200 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
25 chr4:3287600-3288200 Flanking Active TSS NH-A brain
26 chr4:3287600-3288400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr4:3287600-3288400 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr4:3287600-3288400 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr4:3287600-3288400 Bivalent Enhancer Colonic Mucosa Colon
30 chr4:3287600-3288400 Enhancers Pancreas Pancrea
31 chr4:3287600-3288400 Bivalent Enhancer Rectal Mucosa Donor 29 rectum
32 chr4:3287600-3288400 Flanking Active TSS Osteobl bone
33 chr4:3287600-3288600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr4:3287600-3288600 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr4:3287600-3288600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr4:3287600-3288600 Enhancers Placenta Amnion Placenta Amnion
37 chr4:3287600-3288800 Bivalent Enhancer Primary T cells fromperipheralblood blood
38 chr4:3287600-3288800 Enhancers Esophagus oesophagus
39 chr4:3287600-3288800 Bivalent/Poised TSS HepG2 liver
40 chr4:3287600-3289400 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr4:3287600-3289600 Enhancers Fetal Lung lung
42 chr4:3287600-3289800 Enhancers Ovary ovary
43 chr4:3287600-3290000 Enhancers Cortex derived primary cultured neurospheres brain
44 chr4:3287600-3290200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr4:3287600-3290400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
46 chr4:3287600-3290400 Bivalent Enhancer Fetal Muscle Leg muscle
47 chr4:3287600-3291000 Enhancers Brain Germinal Matrix brain
48 chr4:3287800-3288000 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr4:3287800-3288000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr4:3287800-3288000 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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