Variant report

Variant rs3129888
Chromosome Location chr6:32411726-32411727
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32407800-32415000 Weak transcription Gastric stomach
2 chr6:32408000-32412800 Weak transcription Right Ventricle heart
3 chr6:32408200-32411800 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
4 chr6:32408200-32412200 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
5 chr6:32408600-32415200 Weak transcription Stomach Mucosa stomach
6 chr6:32408800-32411800 Weak transcription Liver Liver
7 chr6:32408800-32415600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:32409200-32412200 Transcr. at gene 5' and 3' GM12878-XiMat blood
9 chr6:32409200-32413000 Weak transcription Primary T cells fromperipheralblood blood
10 chr6:32409400-32412200 Weak transcription Colonic Mucosa Colon
11 chr6:32410000-32411800 Weak transcription Thymus Thymus
12 chr6:32410000-32412600 Strong transcription Fetal Thymus thymus
13 chr6:32410000-32413200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr6:32410200-32411800 Genic enhancers Spleen Spleen
15 chr6:32410200-32413200 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr6:32410400-32413200 Strong transcription Primary hematopoietic stem cells blood
17 chr6:32410400-32413400 Weak transcription Brain Hippocampus Middle brain
18 chr6:32410600-32411800 Genic enhancers Primary monocytes fromperipheralblood blood
19 chr6:32410600-32412600 Strong transcription Duodenum Mucosa Duodenum
20 chr6:32410600-32412800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr6:32410600-32414000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr6:32411000-32411800 Strong transcription Lung lung
23 chr6:32411000-32412000 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr6:32411000-32412400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:32411000-32412600 Strong transcription Adipose Nuclei Adipose
26 chr6:32411200-32412000 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr6:32411200-32413400 Weak transcription Brain Anterior Caudate brain
28 chr6:32411200-32413600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr6:32411400-32413400 Genic enhancers Primary B cells from peripheral blood blood
30 chr6:32411600-32413200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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