Variant report

Variant rs3130461
Chromosome Location chr6:31164700-31164701
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31141800-31164800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:31154400-31164800 Weak transcription Gastric stomach
3 chr6:31155400-31164800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:31157400-31164800 Weak transcription H1 Cell Line embryonic stem cell
5 chr6:31160800-31164800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr6:31163800-31164800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
7 chr6:31163800-31165000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr6:31163800-31165600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr6:31164000-31164800 Enhancers Fetal Muscle Leg muscle
10 chr6:31164200-31164800 Enhancers Primary monocytes fromperipheralblood blood
11 chr6:31164200-31164800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
12 chr6:31164200-31164800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
13 chr6:31164200-31164800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr6:31164200-31164800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
15 chr6:31164200-31164800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
16 chr6:31164200-31164800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
17 chr6:31164200-31164800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr6:31164200-31164800 Transcr. at gene 5' and 3' K562 blood
19 chr6:31164200-31165000 Flanking Active TSS Primary T cells fromperipheralblood blood
20 chr6:31164200-31165000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
21 chr6:31164200-31165000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
22 chr6:31164200-31165000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
23 chr6:31164200-31165000 Enhancers Stomach Mucosa stomach
24 chr6:31164200-31165000 Enhancers Spleen Spleen
25 chr6:31164200-31165000 Flanking Active TSS Dnd41 blood
26 chr6:31164200-31167200 Active TSS Rectal Mucosa Donor 29 rectum
27 chr6:31164400-31164800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr6:31164400-31164800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:31164400-31164800 Flanking Active TSS Primary T cells from cord blood blood
30 chr6:31164400-31164800 Flanking Active TSS Primary hematopoietic stem cells blood
31 chr6:31164400-31164800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
32 chr6:31164400-31164800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
33 chr6:31164400-31164800 Enhancers Fetal Lung lung
34 chr6:31164400-31164800 Enhancers Fetal Muscle Trunk muscle
35 chr6:31164400-31164800 Enhancers Placenta Placenta
36 chr6:31164400-31164800 Flanking Active TSS GM12878-XiMat blood
37 chr6:31164400-31164800 Flanking Active TSS Hela-S3 cervix
38 chr6:31164400-31165000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr6:31164400-31165000 Flanking Active TSS Primary B cells from cord blood blood
40 chr6:31164400-31165000 Flanking Active TSS Brain Inferior Temporal Lobe brain
41 chr6:31164400-31165000 Flanking Active TSS Duodenum Mucosa Duodenum
42 chr6:31164400-31165000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
43 chr6:31164400-31165000 Flanking Active TSS Stomach Smooth Muscle stomach
44 chr6:31164400-31166600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr6:31164400-31166800 Active TSS Breast Myoepithelial Primary Cells Breast
46 chr6:31164400-31166800 Active TSS Colon Smooth Muscle Colon
47 chr6:31164400-31166800 Active TSS A549 lung
48 chr6:31164400-31168400 Active TSS Duodenum Smooth Muscle Duodenum
49 chr6:31164600-31164800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
50 chr6:31164600-31164800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung

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