Variant report

No.	Distal block	Cell Line	Cell type
1	chr4:127528226..127531522-chr4:127532381..127536256,3	K562	blood:
2	chr4:127518574..127520733-chr4:127527812..127529552,2	K562	blood:
3	chr4:127527862..127530808-chr4:127533552..127535543,3	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1009241	0.84[EUR][1000 genomes]
rs11098887	0.81[ASN][1000 genomes]
rs12644763	0.81[ASN][1000 genomes]
rs13112476	0.86[CEU][hapmap];0.86[JPT][hapmap]
rs13128836	0.80[ASN][1000 genomes]
rs1511143	0.80[ASN][1000 genomes]
rs1511144	0.87[CEU][hapmap];0.85[JPT][hapmap];0.92[YRI][hapmap];0.80[AFR][1000 genomes]
rs1949106	0.81[ASN][1000 genomes]
rs3114040	0.94[EUR][1000 genomes]
rs313087	0.85[EUR][1000 genomes]
rs313095	0.92[EUR][1000 genomes]
rs313096	0.93[EUR][1000 genomes]
rs313097	0.93[EUR][1000 genomes]
rs313098	0.92[EUR][1000 genomes]
rs313105	0.94[EUR][1000 genomes]
rs313144	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs403001	0.91[CEU][hapmap];0.80[JPT][hapmap];0.88[TSI][hapmap];0.82[EUR][1000 genomes]
rs405317	0.94[EUR][1000 genomes]
rs409435	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs431286	0.94[EUR][1000 genomes]
rs446534	0.91[EUR][1000 genomes]
rs66553133	0.80[ASN][1000 genomes]
rs67848246	0.80[ASN][1000 genomes]
rs72672076	0.80[ASN][1000 genomes]
rs7681514	0.81[ASN][1000 genomes]
rs7686450	0.81[ASN][1000 genomes]
rs7686497	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012833	chr4:127468474-127760933	Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv537242	chr4:127468474-127760933	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv524850	chr4:127470903-127768849	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1013854	chr4:127508969-127663216	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127519400-127532800	Weak transcription	K562	blood

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