Variant report

Variant	rs314723
Chromosome Location	chr2:125557813-125557814
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12465657	0.84[ASN][1000 genomes]
rs12474831	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs12619535	0.82[CHB][hapmap];0.96[CHD][hapmap];0.94[JPT][hapmap]
rs17011975	1.00[CHD][hapmap];0.80[MEX][hapmap]
rs314710	0.80[MEX][hapmap]
rs314715	0.84[CHD][hapmap];0.93[LWK][hapmap];0.96[MKK][hapmap];0.96[YRI][hapmap]
rs314718	0.88[CHD][hapmap]
rs922863	0.82[CHB][hapmap];0.96[CHD][hapmap];0.94[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs314723	WDR33	cis	parietal	SCAN

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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