Variant report

Variant	rs328191
Chromosome Location	chr18:44210569-44210570
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs167873	0.82[EUR][1000 genomes]
rs328123	0.82[EUR][1000 genomes]
rs328124	0.82[EUR][1000 genomes]
rs328130	0.81[EUR][1000 genomes]
rs328171	0.88[EUR][1000 genomes]
rs328188	0.82[EUR][1000 genomes]
rs658951	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428355	chr18:44160181-44406285	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44208600-44210800	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr18:44208800-44210600	Enhancers	Dnd41	blood
3	chr18:44209200-44212200	Weak transcription	Brain Anterior Caudate	brain
4	chr18:44209800-44210800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr18:44210000-44213000	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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