The 2.0 version of rSNPBase

Variant report

Variant rs336293
Chromosome Location chr4:143013450-143013451
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:142948400-143029200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr4:142966000-143013800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr4:142988000-143015400 Weak transcription Aorta Aorta
4 chr4:142988200-143029400 Weak transcription Left Ventricle heart
5 chr4:142990000-143051200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr4:142997600-143014000 Weak transcription Fetal Muscle Leg muscle
7 chr4:142997800-143024600 Weak transcription Primary hematopoietic stem cells blood
8 chr4:143001400-143040600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr4:143002600-143041800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr4:143004000-143015400 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr4:143004000-143017000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr4:143004000-143021800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr4:143004600-143051600 Weak transcription Pancreas Pancrea
14 chr4:143006200-143016400 Weak transcription Rectal Smooth Muscle rectum
15 chr4:143007200-143014000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr4:143007200-143015400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr4:143007200-143016800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr4:143007400-143025400 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr4:143007600-143014000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr4:143007600-143024800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr4:143007800-143013800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr4:143007800-143015400 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr4:143008000-143025600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr4:143008400-143014400 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr4:143008600-143014000 Weak transcription Dnd41 blood
26 chr4:143009200-143014000 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr4:143010000-143014600 Enhancers NH-A brain
28 chr4:143010400-143043400 Weak transcription Psoas Muscle Psoas
29 chr4:143010400-143057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr4:143011000-143015400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr4:143011600-143014000 Enhancers HUVEC blood vessel
32 chr4:143011600-143014400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr4:143012000-143013600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr4:143012400-143023000 Strong transcription Primary T cells fromperipheralblood blood
35 chr4:143012400-143040600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr4:143012800-143014200 Strong transcription Primary T cells from cord blood blood
37 chr4:143012800-143017400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr4:143013000-143014000 Weak transcription HSMM muscle
39 chr4:143013000-143014200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr4:143013000-143014200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr4:143013000-143016400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr4:143013000-143016400 Weak transcription Osteobl bone
43 chr4:143013000-143016600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr4:143013000-143016800 Weak transcription Colon Smooth Muscle Colon
45 chr4:143013000-143017000 Weak transcription NHLF lung
46 chr4:143013200-143015800 Strong transcription HSMMtube muscle
47 chr4:143013400-143014000 Enhancers A549 lung
48 chr4:143013400-143014000 Weak transcription HMEC breast
49 chr4:143013400-143014000 Weak transcription NHEK skin
50 chr4:143013400-143014200 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015