The 2.0 version of rSNPBase

Variant report

Variant rs336316
Chromosome Location chr4:143010130-143010131
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:142948400-143029200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr4:142966000-143013800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr4:142985800-143011000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr4:142988000-143015400 Weak transcription Aorta Aorta
5 chr4:142988200-143029400 Weak transcription Left Ventricle heart
6 chr4:142990000-143051200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr4:142996800-143012600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr4:142997600-143014000 Weak transcription Fetal Muscle Leg muscle
9 chr4:142997800-143024600 Weak transcription Primary hematopoietic stem cells blood
10 chr4:143001400-143040600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr4:143001600-143010400 Weak transcription NHEK skin
12 chr4:143002000-143011200 Weak transcription HSMM muscle
13 chr4:143002600-143041800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr4:143004000-143015400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr4:143004000-143017000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr4:143004000-143021800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr4:143004600-143051600 Weak transcription Pancreas Pancrea
18 chr4:143006200-143012200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr4:143006200-143016400 Weak transcription Rectal Smooth Muscle rectum
20 chr4:143007000-143011600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr4:143007200-143012600 Weak transcription HSMMtube muscle
22 chr4:143007200-143012800 Weak transcription Primary T cells from cord blood blood
23 chr4:143007200-143014000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr4:143007200-143015400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr4:143007200-143016800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr4:143007400-143025400 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr4:143007600-143014000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr4:143007600-143024800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr4:143007800-143010200 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr4:143007800-143013800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr4:143007800-143015400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr4:143008000-143012200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr4:143008000-143025600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr4:143008400-143011600 Weak transcription HUVEC blood vessel
35 chr4:143008400-143012400 Weak transcription Primary T cells fromperipheralblood blood
36 chr4:143008400-143014400 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr4:143008600-143012600 Enhancers NHDF-Ad bronchial
38 chr4:143008600-143014000 Weak transcription Dnd41 blood
39 chr4:143009200-143014000 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr4:143009400-143010800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr4:143009400-143012800 Enhancers Hela-S3 cervix
42 chr4:143009600-143010200 Enhancers NHLF lung
43 chr4:143009600-143010400 Enhancers Psoas Muscle Psoas
44 chr4:143009600-143011200 Enhancers Fetal Heart heart
45 chr4:143009600-143011200 Genic enhancers A549 lung
46 chr4:143009600-143013400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr4:143009800-143010600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr4:143010000-143010400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr4:143010000-143010400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr4:143010000-143010600 Enhancers HMEC breast

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Last update: Aug 31, 2015