The 2.0 version of rSNPBase

Variant report

Variant rs340051
Chromosome Location chr5:145235121-145235122
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145227000-145235400 Weak transcription Fetal Heart heart
2 chr5:145231000-145235800 Enhancers Fetal Intestine Large intestine
3 chr5:145231400-145236000 Enhancers Fetal Intestine Small intestine
4 chr5:145232800-145235600 Weak transcription Aorta Aorta
5 chr5:145232800-145235800 Weak transcription Pancreas Pancrea
6 chr5:145233200-145235800 Weak transcription Colonic Mucosa Colon
7 chr5:145233400-145235600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr5:145233400-145235600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr5:145233800-145235400 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr5:145233800-145236400 Enhancers Stomach Mucosa stomach
11 chr5:145234000-145235400 Enhancers HUES6 Cell Line embryonic stem cell
12 chr5:145234000-145235600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:145234000-145235600 Enhancers HUES64 Cell Line embryonic stem cell
14 chr5:145234000-145235600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr5:145234000-145235600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr5:145234000-145235600 Enhancers NHEK skin
17 chr5:145234000-145235600 Enhancers Osteobl bone
18 chr5:145234000-145235800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr5:145234000-145235800 Enhancers HUVEC blood vessel
20 chr5:145234000-145235800 Enhancers NH-A brain
21 chr5:145234000-145235800 Enhancers NHDF-Ad bronchial
22 chr5:145234000-145236000 Enhancers HMEC breast
23 chr5:145234000-145236400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr5:145234000-145236400 Enhancers Small Intestine intestine
25 chr5:145234200-145235200 Enhancers HSMM muscle
26 chr5:145234200-145235600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:145234200-145235600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr5:145234200-145235600 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr5:145234200-145235800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr5:145234200-145235800 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr5:145234200-145235800 Enhancers Muscle Satellite Cultured Cells --
32 chr5:145234200-145235800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr5:145234200-145235800 Enhancers NHLF lung
34 chr5:145234200-145236200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr5:145234400-145235600 Enhancers Primary hematopoietic stem cells blood
36 chr5:145234400-145235600 Weak transcription Psoas Muscle Psoas
37 chr5:145234400-145236000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr5:145234400-145236400 Enhancers Gastric stomach
39 chr5:145234600-145235200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr5:145234600-145235400 Enhancers iPS-20b Cell Line embryonic stem cell
41 chr5:145234600-145235600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr5:145234600-145235600 Enhancers H9 Cell Line embryonic stem cell
43 chr5:145234600-145235600 Enhancers HUES48 Cell Line embryonic stem cell
44 chr5:145234600-145235600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr5:145234600-145235600 Weak transcription Lung lung
46 chr5:145234600-145235800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:145234600-145235800 Enhancers Duodenum Mucosa Duodenum
48 chr5:145234600-145236000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr5:145234800-145235200 Weak transcription Adipose Nuclei Adipose
50 chr5:145234800-145235200 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015