Variant report
Variant | rs340143 |
---|---|
Chromosome Location | chr3:111781594-111781595 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:111780283..111781991-chr3:111783090..111785256,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10934132 | 0.85[CEU][hapmap];0.86[EUR][1000 genomes] |
rs10934133 | 0.84[CEU][hapmap];0.88[EUR][1000 genomes] |
rs11711986 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11711987 | 0.85[CEU][hapmap];0.88[EUR][1000 genomes] |
rs11713084 | 0.84[CEU][hapmap];0.90[EUR][1000 genomes] |
rs11713897 | 0.90[CEU][hapmap];0.89[EUR][1000 genomes] |
rs11720631 | 0.85[CEU][hapmap];0.88[EUR][1000 genomes] |
rs1662265 | 0.84[YRI][hapmap] |
rs16859113 | 0.89[EUR][1000 genomes] |
rs16859114 | 0.89[EUR][1000 genomes] |
rs16859115 | 0.85[CEU][hapmap];0.89[EUR][1000 genomes] |
rs16859117 | 0.89[EUR][1000 genomes] |
rs16859126 | 0.84[CEU][hapmap];0.91[EUR][1000 genomes] |
rs17443294 | 0.89[EUR][1000 genomes] |
rs17443498 | 0.84[CEU][hapmap];0.89[EUR][1000 genomes] |
rs17443548 | 0.91[EUR][1000 genomes] |
rs17502804 | 0.84[CEU][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs17503000 | 0.91[EUR][1000 genomes] |
rs340146 | 0.83[YRI][hapmap] |
rs4682351 | 0.85[CEU][hapmap];0.90[EUR][1000 genomes] |
rs4682352 | 0.94[CEU][hapmap];0.91[EUR][1000 genomes] |
rs4682353 | 0.85[CEU][hapmap];0.91[EUR][1000 genomes] |
rs55971748 | 0.91[EUR][1000 genomes] |
rs56039551 | 0.91[EUR][1000 genomes] |
rs73853294 | 0.91[EUR][1000 genomes] |
rs774770 | 0.87[YRI][hapmap] |
rs920708 | 0.85[CEU][hapmap];0.89[EUR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:111780800-111793800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |