Variant report
| Variant | rs34077590 |
|---|---|
| Chromosome Location | chr2:54796461-54796462 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:54787600-54796800 | Weak transcription | Aorta | Aorta |
| 2 | chr2:54787600-54797000 | Weak transcription | Gastric | stomach |
| 3 | chr2:54787800-54797200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr2:54788400-54797600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 5 | chr2:54788600-54796800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr2:54788600-54796800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 7 | chr2:54789600-54796800 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr2:54789800-54801400 | Enhancers | Liver | Liver |
| 9 | chr2:54790000-54797200 | Weak transcription | Lung | lung |
| 10 | chr2:54791200-54801200 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 11 | chr2:54791600-54797000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 12 | chr2:54791800-54797200 | Weak transcription | Spleen | Spleen |
| 13 | chr2:54792000-54796600 | Genic enhancers | HepG2 | liver |
| 14 | chr2:54792000-54796800 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr2:54792200-54796800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 16 | chr2:54792400-54796800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr2:54792400-54796800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr2:54792400-54797000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr2:54792400-54797200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 20 | chr2:54793000-54799800 | Enhancers | Stomach Mucosa | stomach |
| 21 | chr2:54794400-54804200 | Weak transcription | Ovary | ovary |
| 22 | chr2:54794600-54796800 | Weak transcription | Small Intestine | intestine |
| 23 | chr2:54795000-54796800 | Enhancers | Dnd41 | blood |
| 24 | chr2:54795000-54797600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 25 | chr2:54795000-54799400 | Enhancers | Fetal Heart | heart |
| 26 | chr2:54795200-54799000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 27 | chr2:54795200-54799800 | Enhancers | Fetal Intestine Large | intestine |
| 28 | chr2:54795200-54802200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 29 | chr2:54795400-54796800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 30 | chr2:54795400-54799200 | Enhancers | HUVEC | blood vessel |
| 31 | chr2:54795400-54801400 | Enhancers | Fetal Thymus | thymus |
| 32 | chr2:54795600-54796800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 33 | chr2:54795600-54796800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 34 | chr2:54795600-54796800 | Enhancers | Colon Smooth Muscle | Colon |
| 35 | chr2:54795600-54797000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 36 | chr2:54795600-54799400 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 37 | chr2:54795600-54802400 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 38 | chr2:54795800-54796600 | Active TSS | GM12878-XiMat | blood |
| 39 | chr2:54795800-54797000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 40 | chr2:54795800-54797400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 41 | chr2:54795800-54797400 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 42 | chr2:54795800-54797800 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 43 | chr2:54795800-54798400 | Enhancers | NH-A | brain |
| 44 | chr2:54795800-54798800 | Enhancers | Right Ventricle | heart |
| 45 | chr2:54795800-54799200 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 46 | chr2:54795800-54799400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 47 | chr2:54795800-54799400 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 48 | chr2:54795800-54799400 | Flanking Active TSS | A549 | lung |
| 49 | chr2:54795800-54800000 | Enhancers | NHLF | lung |
| 50 | chr2:54795800-54801200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
