The 2.0 version of rSNPBase

Variant report

Variant rs7602992
Chromosome Location chr2:54795929-54795930
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54787600-54796800 Weak transcription Aorta Aorta
2 chr2:54787600-54797000 Weak transcription Gastric stomach
3 chr2:54787800-54796200 Weak transcription Esophagus oesophagus
4 chr2:54787800-54797200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr2:54788000-54796000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr2:54788400-54797600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:54788600-54796000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:54788600-54796200 Weak transcription Colonic Mucosa Colon
9 chr2:54788600-54796200 Weak transcription Fetal Muscle Leg muscle
10 chr2:54788600-54796400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr2:54788600-54796800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:54788600-54796800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:54788800-54796000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:54789200-54796200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr2:54789400-54796000 Weak transcription Brain Hippocampus Middle brain
16 chr2:54789400-54796000 Weak transcription HSMMtube muscle
17 chr2:54789400-54796200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr2:54789400-54796200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr2:54789400-54796400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr2:54789600-54796000 Weak transcription Brain Angular Gyrus brain
21 chr2:54789600-54796000 Weak transcription Brain Inferior Temporal Lobe brain
22 chr2:54789600-54796000 Weak transcription Brain Substantia Nigra brain
23 chr2:54789600-54796000 Weak transcription HMEC breast
24 chr2:54789600-54796000 Weak transcription HSMM muscle
25 chr2:54789600-54796000 Weak transcription NHDF-Ad bronchial
26 chr2:54789600-54796000 Weak transcription Osteobl bone
27 chr2:54789600-54796200 Enhancers Primary B cells from peripheral blood blood
28 chr2:54789600-54796800 Weak transcription Psoas Muscle Psoas
29 chr2:54789800-54796000 Enhancers Primary T cells fromperipheralblood blood
30 chr2:54789800-54801400 Enhancers Liver Liver
31 chr2:54790000-54796000 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr2:54790000-54796200 Weak transcription Fetal Brain Male brain
33 chr2:54790000-54797200 Weak transcription Lung lung
34 chr2:54790200-54796000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:54790200-54796000 Weak transcription Thymus Thymus
36 chr2:54790400-54796400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr2:54790600-54796000 Weak transcription Muscle Satellite Cultured Cells --
38 chr2:54790600-54796200 Enhancers Primary T helper cells fromperipheralblood blood
39 chr2:54790600-54796200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr2:54791200-54801200 Enhancers Primary neutrophils fromperipheralblood blood
41 chr2:54791600-54797000 Weak transcription Stomach Smooth Muscle stomach
42 chr2:54791800-54797200 Weak transcription Spleen Spleen
43 chr2:54792000-54796600 Genic enhancers HepG2 liver
44 chr2:54792000-54796800 Weak transcription Fetal Stomach stomach
45 chr2:54792200-54796800 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr2:54792400-54796200 Weak transcription Left Ventricle heart
47 chr2:54792400-54796400 Weak transcription Placenta Amnion Placenta Amnion
48 chr2:54792400-54796800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr2:54792400-54796800 Weak transcription Fetal Muscle Trunk muscle
50 chr2:54792400-54797000 Weak transcription Breast Myoepithelial Primary Cells Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015