The 2.0 version of rSNPBase

Variant report

Variant rs34257762
Chromosome Location chr10:97204610-97204611
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97169600-97204800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr10:97171000-97208000 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr10:97185800-97205000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr10:97187200-97205400 Weak transcription K562 blood
5 chr10:97189200-97205000 Weak transcription Esophagus oesophagus
6 chr10:97190200-97207200 Weak transcription Colonic Mucosa Colon
7 chr10:97190800-97208200 Weak transcription H1 Cell Line embryonic stem cell
8 chr10:97191000-97204800 Weak transcription Duodenum Mucosa Duodenum
9 chr10:97193400-97210800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr10:97193800-97208000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr10:97195400-97204800 Weak transcription Fetal Lung lung
12 chr10:97195800-97204800 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr10:97195800-97204800 Weak transcription Spleen Spleen
14 chr10:97195800-97205000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr10:97197400-97204800 Weak transcription Brain Substantia Nigra brain
16 chr10:97197400-97204800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr10:97197400-97204800 Weak transcription HSMMtube muscle
18 chr10:97197600-97204800 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr10:97197600-97207400 Weak transcription Brain Hippocampus Middle brain
20 chr10:97197600-97207600 Weak transcription Brain Germinal Matrix brain
21 chr10:97198200-97204800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr10:97198400-97207600 Weak transcription Fetal Brain Female brain
23 chr10:97198800-97205800 Enhancers Rectal Smooth Muscle rectum
24 chr10:97200200-97208800 Enhancers Colon Smooth Muscle Colon
25 chr10:97200400-97205200 Weak transcription Fetal Intestine Small intestine
26 chr10:97200800-97206800 Enhancers HepG2 liver
27 chr10:97201200-97204800 Weak transcription Right Atrium heart
28 chr10:97201400-97207400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr10:97201600-97204800 Weak transcription Pancreas Pancrea
30 chr10:97201600-97204800 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr10:97201600-97204800 Weak transcription Stomach Mucosa stomach
32 chr10:97201600-97207400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr10:97202400-97204800 Weak transcription Right Ventricle heart
34 chr10:97202400-97205000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr10:97202400-97205800 Weak transcription Fetal Intestine Large intestine
36 chr10:97202800-97204800 Enhancers Skeletal Muscle Male skeletal muscle
37 chr10:97202800-97209200 Enhancers Fetal Muscle Leg muscle
38 chr10:97203000-97204800 Weak transcription Gastric stomach
39 chr10:97203200-97208400 Enhancers Liver Liver
40 chr10:97203800-97209400 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr10:97204000-97205600 Enhancers Psoas Muscle Psoas
42 chr10:97204000-97208600 Enhancers Left Ventricle heart
43 chr10:97204200-97204800 Enhancers Stomach Smooth Muscle stomach
44 chr10:97204200-97206000 Enhancers Brain Anterior Caudate brain
45 chr10:97204400-97204800 Enhancers Fetal Heart heart
46 chr10:97204400-97204800 Weak transcription Fetal Muscle Trunk muscle
47 chr10:97204400-97204800 Enhancers A549 lung
48 chr10:97204400-97206000 Enhancers Fetal Brain Male brain
49 chr10:97204400-97206400 Enhancers Brain Angular Gyrus brain
50 chr10:97204600-97204800 Active TSS Aorta Aorta

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Last update: Aug 31, 2015