Variant report

Variant	rs34975945
Chromosome Location	chr10:97184619-97184620
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12773574	0.82[EUR][1000 genomes]
rs12782272	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34235944	0.82[EUR][1000 genomes]
rs34257762	0.95[AMR][1000 genomes]
rs35242068	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs35561941	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs41315245	0.82[EUR][1000 genomes]

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97154400-97190800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:97157000-97190400	Weak transcription	Spleen	Spleen
3	chr10:97158600-97199600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr10:97159200-97187000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr10:97166400-97185800	Weak transcription	Fetal Lung	lung
6	chr10:97169600-97204800	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr10:97170600-97197800	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr10:97171000-97186600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr10:97171000-97208000	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr10:97173600-97185200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr10:97175000-97189800	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr10:97175800-97187200	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr10:97175800-97204000	Weak transcription	Psoas Muscle	Psoas
14	chr10:97176000-97189000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr10:97176000-97196800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr10:97176000-97199200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr10:97176200-97190400	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr10:97178400-97188600	Strong transcription	Liver	Liver
19	chr10:97178800-97184800	Strong transcription	Placenta	Placenta
20	chr10:97178800-97186200	Strong transcription	HepG2	liver
21	chr10:97178800-97198800	Genic enhancers	Colon Smooth Muscle	Colon
22	chr10:97179200-97187200	Strong transcription	HSMMtube	muscle
23	chr10:97180200-97186200	Enhancers	Fetal Brain Male	brain
24	chr10:97180800-97195400	Weak transcription	Ovary	ovary
25	chr10:97181200-97193600	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
26	chr10:97181400-97185000	Weak transcription	K562	blood
27	chr10:97181800-97193000	Genic enhancers	Stomach Smooth Muscle	stomach
28	chr10:97182000-97190800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr10:97182200-97196800	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr10:97183000-97184800	Genic enhancers	Left Ventricle	heart
31	chr10:97183000-97186200	Enhancers	Fetal Heart	heart
32	chr10:97183200-97184800	Strong transcription	Fetal Muscle Trunk	muscle
33	chr10:97183200-97184800	Genic enhancers	Rectal Smooth Muscle	rectum
34	chr10:97183200-97194200	Weak transcription	HSMM	muscle
35	chr10:97183400-97188400	Weak transcription	Brain Germinal Matrix	brain
36	chr10:97183600-97186400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr10:97183600-97187200	Weak transcription	Adipose Nuclei	Adipose
38	chr10:97183600-97187800	Weak transcription	Colonic Mucosa	Colon
39	chr10:97183600-97188400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr10:97183600-97188400	Weak transcription	Brain Cingulate Gyrus	brain
41	chr10:97183800-97185000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr10:97183800-97185600	Weak transcription	Cortex derived primary cultured neurospheres	brain
43	chr10:97183800-97186200	Weak transcription	GM12878-XiMat	blood
44	chr10:97183800-97186600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr10:97183800-97187600	Weak transcription	Duodenum Smooth Muscle	Duodenum
46	chr10:97183800-97188400	Weak transcription	Brain Substantia Nigra	brain
47	chr10:97183800-97188600	Weak transcription	Brain Angular Gyrus	brain
48	chr10:97183800-97189200	Weak transcription	Duodenum Mucosa	Duodenum
49	chr10:97183800-97190000	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr10:97183800-97190400	Strong transcription	Fetal Stomach	stomach

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