Variant report

Variant	rs34235944
Chromosome Location	chr10:97169137-97169138
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:97161181..97166322-chr10:97166660..97170109,5	K562	blood:
2	chr10:97167985..97169534-chr10:97171179..97173554,2	K562	blood:
3	chr10:97161181..97164429-chr10:97166660..97169503,3	K562	blood:
4	chr10:97168759..97171554-chr10:97179221..97181163,2	K562	blood:

Variant related genes	Relation type
ENSG00000095637	Chromatin interaction

rs_ID	r²[population]
rs12771392	0.82[EUR][1000 genomes]
rs12773574	1.00[EUR][1000 genomes]
rs12777787	0.84[EUR][1000 genomes]
rs12782272	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34206975	0.84[EUR][1000 genomes]
rs34258576	0.88[EUR][1000 genomes]
rs34363946	0.84[EUR][1000 genomes]
rs34600466	0.83[EUR][1000 genomes]
rs34969841	0.85[EUR][1000 genomes]
rs34975945	0.82[EUR][1000 genomes]
rs35045072	0.86[EUR][1000 genomes]
rs35265356	0.88[EUR][1000 genomes]
rs35480352	0.81[EUR][1000 genomes]
rs35561941	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35678254	0.88[EUR][1000 genomes]
rs35892931	0.88[EUR][1000 genomes]
rs41315245	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67008126	0.86[EUR][1000 genomes]
rs67201255	0.82[EUR][1000 genomes]
rs72822553	0.84[EUR][1000 genomes]

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97154400-97190800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:97155400-97170800	Enhancers	Right Atrium	heart
3	chr10:97156800-97173400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr10:97156800-97182600	Weak transcription	Esophagus	oesophagus
5	chr10:97157000-97173200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr10:97157000-97174000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr10:97157000-97183200	Weak transcription	Colonic Mucosa	Colon
8	chr10:97157000-97190400	Weak transcription	Spleen	Spleen
9	chr10:97158600-97199600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr10:97159200-97187000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr10:97162800-97171000	Strong transcription	Placenta	Placenta
12	chr10:97162800-97171200	Strong transcription	Fetal Intestine Large	intestine
13	chr10:97163000-97169400	Genic enhancers	Left Ventricle	heart
14	chr10:97165400-97177200	Strong transcription	HepG2	liver
15	chr10:97165800-97169200	Genic enhancers	Fetal Muscle Leg	muscle
16	chr10:97166000-97169600	Genic enhancers	Fetal Stomach	stomach
17	chr10:97166000-97169800	Enhancers	Stomach Mucosa	stomach
18	chr10:97166000-97170000	Enhancers	Brain Angular Gyrus	brain
19	chr10:97166200-97170200	Enhancers	Brain Anterior Caudate	brain
20	chr10:97166400-97169800	Enhancers	Brain Inferior Temporal Lobe	brain
21	chr10:97166400-97185800	Weak transcription	Fetal Lung	lung
22	chr10:97166600-97169400	Enhancers	Rectal Smooth Muscle	rectum
23	chr10:97166600-97170000	Enhancers	Fetal Heart	heart
24	chr10:97166600-97171800	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr10:97166800-97170000	Enhancers	Duodenum Smooth Muscle	Duodenum
26	chr10:97167000-97173600	Weak transcription	Gastric	stomach
27	chr10:97167000-97173800	Weak transcription	Brain Germinal Matrix	brain
28	chr10:97167200-97169800	Genic enhancers	Colon Smooth Muscle	Colon
29	chr10:97167200-97173800	Weak transcription	Pancreas	Pancrea
30	chr10:97167200-97183200	Weak transcription	Duodenum Mucosa	Duodenum
31	chr10:97167400-97171000	Enhancers	Cortex derived primary cultured neurospheres	brain
32	chr10:97167600-97170400	Genic enhancers	Skeletal Muscle Male	skeletal muscle
33	chr10:97167600-97172000	Genic enhancers	Skeletal Muscle Female	skeletal muscle
34	chr10:97167800-97169200	Enhancers	HUES64 Cell Line	embryonic stem cell
35	chr10:97167800-97169800	Enhancers	Fetal Brain Male	brain
36	chr10:97167800-97170000	Enhancers	Brain Cingulate Gyrus	brain
37	chr10:97167800-97171000	Enhancers	iPS-15b Cell Line	embryonic stem cell
38	chr10:97167800-97173400	Weak transcription	Fetal Muscle Trunk	muscle
39	chr10:97168000-97169200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr10:97168000-97169200	Enhancers	Adipose Nuclei	Adipose
41	chr10:97168000-97169400	Enhancers	ES-I3 Cell Line	embryonic stem cell
42	chr10:97168000-97169400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr10:97168000-97169600	Enhancers	Fetal Brain Female	brain
44	chr10:97168000-97170400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
45	chr10:97168000-97170600	Enhancers	H9 Cell Line	embryonic stem cell
46	chr10:97168000-97173400	Weak transcription	Fetal Intestine Small	intestine
47	chr10:97168200-97169400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
48	chr10:97168200-97170200	Weak transcription	Aorta	Aorta
49	chr10:97168200-97170800	Genic enhancers	Stomach Smooth Muscle	stomach
50	chr10:97168200-97171000	Enhancers	Brain Hippocampus Middle	brain

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