Variant report

Variant	rs35892931
Chromosome Location	chr10:97164983-97164984
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97161181..97166322-chr10:97166660..97170109,5	K562	blood:
2	chr10:97151073..97155956-chr10:97162503..97165670,4	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11545359	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12771392	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12773574	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs12777787	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12782272	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34206975	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34235944	0.88[EUR][1000 genomes]
rs34258576	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34363946	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34600466	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34969841	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35045072	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35265356	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35348091	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs35561941	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35678254	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35707641	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs41315245	0.88[EUR][1000 genomes]
rs56363857	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs67008126	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs67201255	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs71482354	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72822527	0.80[EUR][1000 genomes]
rs72822553	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]

No data

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97146800-97168400	Weak transcription	Small Intestine	intestine
2	chr10:97151000-97166200	Strong transcription	Liver	Liver
3	chr10:97151800-97168800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr10:97154400-97190800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr10:97154600-97168000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr10:97155400-97168000	Strong transcription	Fetal Intestine Small	intestine
7	chr10:97155400-97170800	Enhancers	Right Atrium	heart
8	chr10:97156000-97166200	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr10:97156800-97173400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr10:97156800-97182600	Weak transcription	Esophagus	oesophagus
11	chr10:97157000-97173200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr10:97157000-97174000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr10:97157000-97183200	Weak transcription	Colonic Mucosa	Colon
14	chr10:97157000-97190400	Weak transcription	Spleen	Spleen
15	chr10:97158600-97199600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr10:97158800-97165800	Weak transcription	Brain Germinal Matrix	brain
17	chr10:97158800-97166400	Weak transcription	Brain Substantia Nigra	brain
18	chr10:97159000-97165400	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr10:97159000-97165600	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr10:97159000-97165600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr10:97159000-97165600	Weak transcription	Fetal Lung	lung
22	chr10:97159000-97166000	Weak transcription	Brain Angular Gyrus	brain
23	chr10:97159000-97166400	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr10:97159000-97166800	Weak transcription	Duodenum Mucosa	Duodenum
25	chr10:97159000-97167800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
26	chr10:97159000-97168000	Weak transcription	H9 Cell Line	embryonic stem cell
27	chr10:97159000-97168000	Weak transcription	HSMM	muscle
28	chr10:97159200-97187000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr10:97159400-97165400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
30	chr10:97159800-97167800	Weak transcription	HUES64 Cell Line	embryonic stem cell
31	chr10:97160000-97166000	Strong transcription	Fetal Stomach	stomach
32	chr10:97160400-97166600	Weak transcription	Fetal Brain Male	brain
33	chr10:97160800-97166200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr10:97161800-97167800	Genic enhancers	Stomach Smooth Muscle	stomach
35	chr10:97162000-97165400	Weak transcription	HepG2	liver
36	chr10:97162000-97165600	Enhancers	Fetal Heart	heart
37	chr10:97162000-97168000	Weak transcription	Ovary	ovary
38	chr10:97162200-97166400	Weak transcription	HMEC	breast
39	chr10:97162800-97165800	Strong transcription	Fetal Muscle Leg	muscle
40	chr10:97162800-97166000	Strong transcription	Fetal Muscle Trunk	muscle
41	chr10:97162800-97171000	Strong transcription	Placenta	Placenta
42	chr10:97162800-97171200	Strong transcription	Fetal Intestine Large	intestine
43	chr10:97163000-97169400	Genic enhancers	Left Ventricle	heart
44	chr10:97163200-97165400	Weak transcription	Fetal Brain Female	brain
45	chr10:97163600-97165000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr10:97163600-97165400	Enhancers	Stomach Mucosa	stomach
47	chr10:97163600-97166000	Genic enhancers	Skeletal Muscle Male	skeletal muscle
48	chr10:97163600-97166000	Genic enhancers	Skeletal Muscle Female	skeletal muscle
49	chr10:97163800-97165000	Enhancers	K562	blood
50	chr10:97163800-97165200	Enhancers	Cortex derived primary cultured neurospheres	brain

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