Variant report

Variant	rs35265356
Chromosome Location	chr10:97166612-97166613
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11545359	1.00[AFR][1000 genomes]
rs12771392	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12773574	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs12777787	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12782272	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34206975	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34235944	0.88[EUR][1000 genomes]
rs34258576	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34363946	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34600466	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34969841	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35045072	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35348091	1.00[AFR][1000 genomes]
rs35561941	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs35678254	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35707641	1.00[AFR][1000 genomes]
rs35892931	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41315245	0.88[EUR][1000 genomes]
rs56363857	0.80[EUR][1000 genomes]
rs67008126	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs67201255	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs71482354	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72822527	0.80[EUR][1000 genomes]
rs72822553	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]

No data

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97146800-97168400	Weak transcription	Small Intestine	intestine
2	chr10:97151800-97168800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr10:97154400-97190800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:97154600-97168000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr10:97155400-97168000	Strong transcription	Fetal Intestine Small	intestine
6	chr10:97155400-97170800	Enhancers	Right Atrium	heart
7	chr10:97156800-97173400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr10:97156800-97182600	Weak transcription	Esophagus	oesophagus
9	chr10:97157000-97173200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr10:97157000-97174000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr10:97157000-97183200	Weak transcription	Colonic Mucosa	Colon
12	chr10:97157000-97190400	Weak transcription	Spleen	Spleen
13	chr10:97158600-97199600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr10:97159000-97166800	Weak transcription	Duodenum Mucosa	Duodenum
15	chr10:97159000-97167800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr10:97159000-97168000	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr10:97159000-97168000	Weak transcription	HSMM	muscle
18	chr10:97159200-97187000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr10:97159800-97167800	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr10:97161800-97167800	Genic enhancers	Stomach Smooth Muscle	stomach
21	chr10:97162000-97168000	Weak transcription	Ovary	ovary
22	chr10:97162800-97171000	Strong transcription	Placenta	Placenta
23	chr10:97162800-97171200	Strong transcription	Fetal Intestine Large	intestine
24	chr10:97163000-97169400	Genic enhancers	Left Ventricle	heart
25	chr10:97163800-97166800	Genic enhancers	Colon Smooth Muscle	Colon
26	chr10:97164000-97167000	Genic enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr10:97164000-97168200	Genic enhancers	Aorta	Aorta
28	chr10:97164000-97168600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr10:97164200-97168000	Genic enhancers	Adipose Nuclei	Adipose
30	chr10:97164400-97168200	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
31	chr10:97164400-97168200	Enhancers	Psoas Muscle	Psoas
32	chr10:97164600-97166800	Genic enhancers	Duodenum Smooth Muscle	Duodenum
33	chr10:97164800-97168400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr10:97165000-97166800	Weak transcription	Lung	lung
35	chr10:97165000-97168000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr10:97165400-97167200	Strong transcription	HUES48 Cell Line	embryonic stem cell
37	chr10:97165400-97177200	Strong transcription	HepG2	liver
38	chr10:97165600-97166800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr10:97165600-97166800	Weak transcription	Brain Cingulate Gyrus	brain
40	chr10:97165600-97167000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr10:97165600-97167000	Enhancers	Gastric	stomach
42	chr10:97165600-97167200	Strong transcription	HUES6 Cell Line	embryonic stem cell
43	chr10:97165600-97167800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr10:97165800-97166800	Strong transcription	Brain Germinal Matrix	brain
45	chr10:97165800-97167200	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
46	chr10:97165800-97169200	Genic enhancers	Fetal Muscle Leg	muscle
47	chr10:97166000-97166800	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
48	chr10:97166000-97167000	Genic enhancers	Fetal Muscle Trunk	muscle
49	chr10:97166000-97167200	Enhancers	Pancreas	Pancrea
50	chr10:97166000-97167800	Weak transcription	H1 Cell Line	embryonic stem cell

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