Variant report

Variant	rs34274745
Chromosome Location	chr14:68461094-68461095
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1033686	1.00[ASN][1000 genomes]
rs1555942	0.84[EUR][1000 genomes]
rs1950764	1.00[ASN][1000 genomes]
rs34050208	1.00[ASN][1000 genomes]
rs72725119	1.00[ASN][1000 genomes]
rs986383	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68450200-68465400	Weak transcription	HepG2	liver
2	chr14:68455000-68461200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr14:68455000-68465200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr14:68455000-68465600	Weak transcription	HSMM	muscle
5	chr14:68455200-68461200	Weak transcription	Ovary	ovary
6	chr14:68455200-68465600	Weak transcription	Primary hematopoietic stem cells	blood
7	chr14:68458400-68465400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr14:68459400-68461400	Weak transcription	Colon Smooth Muscle	Colon
9	chr14:68460600-68461600	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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