Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10498870	0.99[ASN][1000 genomes]
rs13194248	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs13197316	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13200171	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs13208359	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13209483	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13217925	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs1572898	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17688591	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs34516452	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34791579	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs36034975	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs36090294	0.92[ASN][1000 genomes]
rs4492160	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs56227699	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62420104	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs62420119	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6905176	0.91[ASN][1000 genomes]
rs6914372	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6919210	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6940876	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886140	chr6:70354682-70728202	Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv830682	chr6:70397851-70592883	Weak transcription Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70578600-70591600	Weak transcription	Fetal Heart	heart
2	chr6:70580000-70585000	Genic enhancers	Primary B cells from peripheral blood	blood
3	chr6:70582400-70582800	Strong transcription	Primary B cells from cord blood	blood

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