Variant report
| Variant | rs34411183 |
|---|---|
| Chromosome Location | chr14:85836146-85836147 |
| allele | A/G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:21)
| rs_ID | r2[population] |
|---|---|
| rs12813479 | 1.00[AFR][1000 genomes] |
| rs12814596 | 1.00[AFR][1000 genomes] |
| rs12819954 | 1.00[AFR][1000 genomes] |
| rs12820466 | 1.00[AFR][1000 genomes] |
| rs12821548 | 1.00[AFR][1000 genomes] |
| rs12821754 | 1.00[AFR][1000 genomes] |
| rs12827859 | 1.00[AFR][1000 genomes] |
| rs12830962 | 1.00[AFR][1000 genomes] |
| rs17555730 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs34390674 | 1.00[AFR][1000 genomes] |
| rs34461395 | 1.00[AFR][1000 genomes] |
| rs34617614 | 1.00[AFR][1000 genomes] |
| rs34975039 | 1.00[AFR][1000 genomes] |
| rs35144121 | 1.00[AFR][1000 genomes] |
| rs35417019 | 1.00[AFR][1000 genomes] |
| rs35472257 | 1.00[AFR][1000 genomes] |
| rs35506599 | 1.00[AFR][1000 genomes] |
| rs35653702 | 1.00[AFR][1000 genomes] |
| rs35714469 | 1.00[AFR][1000 genomes] |
| rs35846513 | 1.00[AFR][1000 genomes] |
| rs71457699 | 1.00[AFR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1047924 | chr14:85826280-85868228 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:85832400-85840200 | Weak transcription | Ovary | ovary |
