Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr19:44308097-44308194	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:44302857..44305552-chr19:44307242..44310313,3	K562	blood:

Variant related genes	Relation type
LYPD5	TF binding region
ENSG00000159871	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10401526	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs10402032	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs10407794	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11666781	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11673595	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11673603	0.84[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs189445	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2033492	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34257765	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs349026	0.83[ASN][1000 genomes]
rs349027	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs349031	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs349035	0.84[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs349036	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs349054	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs349056	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs379758	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs492099	0.82[AMR][1000 genomes]
rs531471	0.82[AMR][1000 genomes]
rs7251009	0.81[ASN][1000 genomes]
rs797272	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532821	chr19:43842383-44357315	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44304200-44308600	Weak transcription	K562	blood
2	chr19:44304600-44309000	Weak transcription	Spleen	Spleen
3	chr19:44304600-44310200	Weak transcription	HMEC	breast
4	chr19:44304600-44310200	Weak transcription	NHEK	skin

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