Variant report

Variant	rs34500915
Chromosome Location	chr8:79182723-79182724
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13253307	0.85[ASN][1000 genomes]
rs13265230	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13266679	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13274740	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17486452	0.85[ASN][1000 genomes]
rs34607943	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34944617	0.85[ASN][1000 genomes]
rs34963073	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59801513	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831364	chr8:79034769-79223319	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891055	chr8:79110386-79256864	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv831365	chr8:79128833-79281645	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv6266	chr8:79156823-79202020	Enhancers Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3481205	chr8:79178166-79187767	Active TSS	n/a	n/a	inside rSNPs	diseases
6	esv3481206	chr8:79178166-79187767	Active TSS	n/a	n/a	inside rSNPs	diseases
7	nsv442111	chr8:79178614-79185328	Active TSS	n/a	n/a	inside rSNPs	diseases
8	esv2762752	chr8:79178614-79194047	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
9	nsv611571	chr8:79180452-79185503	Active TSS	n/a	n/a	inside rSNPs	diseases
10	nsv611572	chr8:79180452-79186356	Active TSS	n/a	n/a	inside rSNPs	diseases
11	nsv515105	chr8:79180477-79184989	Active TSS	n/a	n/a	inside rSNPs	diseases
12	esv17329	chr8:79180575-79187753	Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:79182400-79183400	Active TSS	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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