The 2.0 version of rSNPBase

Variant report

Variant rs34565064
Chromosome Location chr15:50663903-50663904
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50648000-50667600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:50648200-50664400 Weak transcription Lung lung
3 chr15:50649200-50664400 Weak transcription Right Ventricle heart
4 chr15:50649400-50664000 Weak transcription Rectal Smooth Muscle rectum
5 chr15:50649800-50664200 Weak transcription Small Intestine intestine
6 chr15:50649800-50664600 Weak transcription Psoas Muscle Psoas
7 chr15:50650200-50664000 Weak transcription Spleen Spleen
8 chr15:50651400-50664600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr15:50653000-50664600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr15:50653200-50666800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr15:50654200-50664400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr15:50654200-50665000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr15:50654400-50666400 Weak transcription Brain Cingulate Gyrus brain
14 chr15:50654400-50670600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr15:50654600-50664000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr15:50654600-50664400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr15:50654600-50664400 Weak transcription Fetal Lung lung
18 chr15:50654600-50664400 Weak transcription Osteobl bone
19 chr15:50654600-50664600 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr15:50654600-50666000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr15:50655200-50664400 Weak transcription HMEC breast
22 chr15:50655400-50664600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr15:50655600-50664600 Weak transcription Fetal Intestine Large intestine
24 chr15:50655600-50665200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr15:50655600-50665400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr15:50655800-50664200 Weak transcription Brain Hippocampus Middle brain
27 chr15:50655800-50666000 Weak transcription Brain Germinal Matrix brain
28 chr15:50655800-50666000 Weak transcription Left Ventricle heart
29 chr15:50656000-50664400 Weak transcription Ovary ovary
30 chr15:50656000-50664800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr15:50656000-50665800 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr15:50656000-50674200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr15:50656200-50664400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr15:50656200-50665000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr15:50656600-50664400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr15:50656600-50664600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr15:50656600-50664600 Weak transcription Thymus Thymus
38 chr15:50656600-50664800 Weak transcription Fetal Thymus thymus
39 chr15:50657200-50668200 Weak transcription HSMM muscle
40 chr15:50657400-50666000 Weak transcription HSMMtube muscle
41 chr15:50658200-50664000 Weak transcription NHEK skin
42 chr15:50658200-50674600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr15:50660000-50664800 Strong transcription Primary T cells from cord blood blood
44 chr15:50660800-50669400 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr15:50661400-50664400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr15:50661800-50664400 Weak transcription Fetal Brain Female brain
47 chr15:50661800-50664800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr15:50662400-50672400 Weak transcription A549 lung
49 chr15:50663200-50664800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr15:50663200-50664800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015