The 2.0 version of rSNPBase

Variant report

Variant rs34656088
Chromosome Location chr11:10430104-10430105
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10415600-10436000 Weak transcription Right Ventricle heart
2 chr11:10422200-10430800 Weak transcription Colon Smooth Muscle Colon
3 chr11:10423000-10430400 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr11:10423000-10430600 Weak transcription Primary neutrophils fromperipheralblood blood
5 chr11:10423800-10430600 Weak transcription Brain Angular Gyrus brain
6 chr11:10427200-10431000 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr11:10427200-10431200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr11:10427200-10432600 Enhancers Skeletal Muscle Male skeletal muscle
9 chr11:10427400-10431200 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr11:10427400-10431400 Enhancers Muscle Satellite Cultured Cells --
11 chr11:10427400-10432400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr11:10427400-10432800 Enhancers Skeletal Muscle Female skeletal muscle
13 chr11:10427600-10430600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr11:10427600-10432800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr11:10427800-10430800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:10427800-10435000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr11:10427800-10435200 Weak transcription Brain Hippocampus Middle brain
18 chr11:10427800-10436000 Weak transcription HSMMtube muscle
19 chr11:10428000-10430200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr11:10428000-10431000 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr11:10428200-10430800 Weak transcription Primary B cells from peripheral blood blood
22 chr11:10428200-10435200 Weak transcription Dnd41 blood
23 chr11:10428600-10431200 Enhancers Fetal Brain Male brain
24 chr11:10428800-10430400 Weak transcription Stomach Smooth Muscle stomach
25 chr11:10429000-10430600 Weak transcription Adipose Nuclei Adipose
26 chr11:10429000-10432600 Weak transcription Brain Substantia Nigra brain
27 chr11:10429000-10434000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr11:10429000-10436000 Enhancers Placenta Placenta
29 chr11:10429200-10430600 Weak transcription Primary monocytes fromperipheralblood blood
30 chr11:10429200-10431800 Enhancers Placenta Amnion Placenta Amnion
31 chr11:10429400-10430200 Enhancers Fetal Brain Female brain
32 chr11:10429400-10430600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr11:10429600-10430200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr11:10429600-10430400 Weak transcription Primary hematopoietic stem cells blood
35 chr11:10429600-10430400 Weak transcription Fetal Thymus thymus
36 chr11:10429600-10430600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr11:10429600-10430600 Weak transcription Spleen Spleen
38 chr11:10429600-10430600 Weak transcription HUVEC blood vessel
39 chr11:10429600-10430800 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr11:10429600-10431800 Weak transcription K562 blood
41 chr11:10429600-10432000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr11:10429800-10430600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr11:10429800-10430800 Weak transcription Lung lung
44 chr11:10429800-10430800 Weak transcription A549 lung
45 chr11:10429800-10431000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr11:10429800-10432600 Weak transcription Esophagus oesophagus
47 chr11:10429800-10433800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr11:10429800-10433800 Weak transcription NHEK skin
49 chr11:10429800-10435400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr11:10429800-10435400 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015