Variant report

Variant	rs34727092
Chromosome Location	chr1:179253127-179253128
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10913709	0.81[EUR][1000 genomes]
rs12061572	0.81[EUR][1000 genomes]
rs12066392	0.81[EUR][1000 genomes]
rs12078723	0.81[EUR][1000 genomes]
rs12135682	0.84[EUR][1000 genomes]
rs12143460	0.81[EUR][1000 genomes]
rs12730051	0.81[EUR][1000 genomes]
rs17277834	0.81[EUR][1000 genomes]
rs2247071	0.81[EUR][1000 genomes]
rs2254098	0.82[EUR][1000 genomes]
rs2265932	0.82[EUR][1000 genomes]
rs2493120	0.82[EUR][1000 genomes]
rs4651023	0.81[EUR][1000 genomes]
rs4652362	0.82[EUR][1000 genomes]
rs4652363	0.81[EUR][1000 genomes]
rs68039464	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1005278	chr1:179197645-179371395	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179250800-179256600	Weak transcription	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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