Variant report
Variant | rs34727806 |
---|---|
Chromosome Location | chr2:125745808-125745809 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:3 , 50 per page) page:
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Variant related genes | Relation type |
---|---|
RNU6-259P | TF binding region |
rs_ID | r2[population] |
---|---|
rs12993585 | 1.00[AFR][1000 genomes] |
rs13025135 | 1.00[AFR][1000 genomes] |
rs13025825 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs34528547 | 1.00[AFR][1000 genomes] |
rs35120173 | 1.00[AFR][1000 genomes] |
rs36138820 | 1.00[AFR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv834361 | chr2:125601081-125810992 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 4 gene(s) | inside rSNPs | diseases |
2 | nsv874991 | chr2:125692490-125901811 | Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
3 | nsv834362 | chr2:125733921-125907451 | Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
No data |