Variant report

Variant rs34861398
Chromosome Location chr1:159142150-159142151
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:159140600-159143000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
2 chr1:159140600-159143200 Active TSS HUES48 Cell Line embryonic stem cell
3 chr1:159140600-159143800 Active TSS Brain Anterior Caudate brain
4 chr1:159140800-159142200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:159140800-159142600 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
6 chr1:159140800-159143200 Active TSS H1 Cell Line embryonic stem cell
7 chr1:159140800-159143400 Active TSS H9 Cell Line embryonic stem cell
8 chr1:159141000-159142200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:159141000-159142200 Enhancers Gastric stomach
10 chr1:159141000-159142200 Bivalent/Poised TSS Rectal Mucosa Donor 31 rectum
11 chr1:159141000-159142400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
12 chr1:159141000-159142600 Enhancers Pancreas Pancrea
13 chr1:159141000-159143000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:159141000-159143000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:159141000-159143000 Bivalent/Poised TSS HSMM muscle
16 chr1:159141000-159143200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
17 chr1:159141000-159143200 Active TSS iPS-15b Cell Line embryonic stem cell
18 chr1:159141000-159143200 Active TSS iPS-18 Cell Line embryonic stem cell
19 chr1:159141000-159143200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
20 chr1:159141000-159143200 Bivalent/Poised TSS Brain Angular Gyrus brain
21 chr1:159141000-159143400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
22 chr1:159141000-159143400 Bivalent/Poised TSS Muscle Satellite Cultured Cells --
23 chr1:159141000-159143600 Active TSS HUES64 Cell Line embryonic stem cell
24 chr1:159141000-159143600 Enhancers Spleen Spleen
25 chr1:159141200-159143000 Active TSS ES-WA7 Cell Line embryonic stem cell
26 chr1:159141200-159143000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:159141200-159143200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:159141400-159142200 Bivalent/Poised TSS Colonic Mucosa Colon
29 chr1:159141400-159142200 Bivalent/Poised TSS Fetal Intestine Large intestine
30 chr1:159141400-159142600 Bivalent/Poised TSS Colon Smooth Muscle Colon
31 chr1:159141400-159142800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:159141400-159142800 Bivalent/Poised TSS Fetal Intestine Small intestine
33 chr1:159141400-159142800 Bivalent/Poised TSS Psoas Muscle Psoas
34 chr1:159141400-159143000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:159141400-159143000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:159141400-159143000 Enhancers Lung lung
37 chr1:159141600-159142200 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:159141600-159142200 Enhancers Primary hematopoietic stem cells blood
39 chr1:159141600-159142200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:159141600-159142200 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
41 chr1:159141600-159142200 Active TSS Fetal Brain Male brain
42 chr1:159141600-159142200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
43 chr1:159141600-159142200 Bivalent/Poised TSS A549 lung
44 chr1:159141600-159142200 Bivalent/Poised TSS Osteobl bone
45 chr1:159141600-159142400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
46 chr1:159141600-159142600 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
47 chr1:159141600-159142600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
48 chr1:159141600-159142800 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
49 chr1:159141600-159142800 Bivalent/Poised TSS Placenta Placenta
50 chr1:159141600-159143400 Bivalent Enhancer Primary monocytes fromperipheralblood blood

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