Variant report

Variant	rs12042284
Chromosome Location	chr1:159132649-159132650
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs3026942	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3026955	0.95[EUR][1000 genomes]
rs3027009	0.81[CEU][hapmap];1.00[GIH][hapmap]
rs34861398	1.00[ASN][1000 genomes]
rs56184975	0.95[EUR][1000 genomes]
rs61828174	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61828178	0.91[EUR][1000 genomes]
rs965359	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159112600-159132800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr1:159131000-159132800	Enhancers	HMEC	breast
3	chr1:159131000-159133000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:159131400-159133000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr1:159131400-159133000	Enhancers	NHEK	skin
6	chr1:159131400-159133200	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr1:159131800-159133200	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr1:159131800-159137400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr1:159132000-159132800	Weak transcription	HSMMtube	muscle
10	chr1:159132000-159133200	Weak transcription	HSMM	muscle
11	chr1:159132200-159132800	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr1:159132400-159132800	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr1:159132400-159133200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr1:159132600-159133000	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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