Variant report

Variant	rs61828178
Chromosome Location	chr1:159159041-159159042
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12042284	0.91[EUR][1000 genomes]
rs3026942	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs3026955	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56184975	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs61828174	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72711374	0.84[EUR][1000 genomes]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159157800-159167600	Weak transcription	Spleen	Spleen
2	chr1:159158400-159161400	Weak transcription	Fetal Brain Male	brain
3	chr1:159158400-159174000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr1:159158800-159159400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr1:159158800-159159400	Enhancers	Primary B cells from peripheral blood	blood
6	chr1:159158800-159159600	Weak transcription	Brain Germinal Matrix	brain
7	chr1:159158800-159159600	Weak transcription	Fetal Brain Female	brain
8	chr1:159158800-159160400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr1:159158800-159160800	Weak transcription	Psoas Muscle	Psoas
10	chr1:159158800-159161000	Enhancers	Brain Anterior Caudate	brain
11	chr1:159158800-159161600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr1:159158800-159161800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr1:159158800-159161800	Weak transcription	Brain Angular Gyrus	brain
14	chr1:159158800-159171200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr1:159158800-159177600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr1:159158800-159177800	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr1:159158800-159188800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr1:159159000-159160600	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr1:159159000-159161000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
20	chr1:159159000-159161600	Weak transcription	Brain Inferior Temporal Lobe	brain
21	chr1:159159000-159165800	Weak transcription	Brain Cingulate Gyrus	brain
22	chr1:159159000-159168000	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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