Variant report

Variant rs34878632
Chromosome Location chr15:99645262-99645263
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:99641200-99645400 Weak transcription Brain Substantia Nigra brain
2 chr15:99644800-99645400 Bivalent Enhancer Primary T cells fromperipheralblood blood
3 chr15:99644800-99645600 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr15:99644800-99646000 Active TSS Stomach Smooth Muscle stomach
5 chr15:99644800-99646000 Active TSS HepG2 liver
6 chr15:99644800-99646200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr15:99644800-99646200 Enhancers Liver Liver
8 chr15:99644800-99646200 Active TSS Hela-S3 cervix
9 chr15:99644800-99646400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
10 chr15:99644800-99646600 Active TSS NHLF lung
11 chr15:99644800-99646600 Active TSS Osteobl bone
12 chr15:99644800-99646800 Active TSS Brain Angular Gyrus brain
13 chr15:99644800-99647200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
14 chr15:99645000-99645400 Active TSS Fetal Stomach stomach
15 chr15:99645000-99645400 Active TSS Rectal Mucosa Donor 29 rectum
16 chr15:99645000-99645600 Flanking Bivalent TSS/Enh Primary T helper cells PMA-I stimulated --
17 chr15:99645000-99645600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
18 chr15:99645000-99645800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr15:99645000-99645800 Active TSS Sigmoid Colon Sigmoid Colon
20 chr15:99645000-99645800 Active TSS Skeletal Muscle Female skeletal muscle
21 chr15:99645000-99646000 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr15:99645000-99646000 Active TSS Brain Hippocampus Middle brain
23 chr15:99645000-99646200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr15:99645000-99646200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
25 chr15:99645000-99646200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
26 chr15:99645000-99646200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr15:99645000-99646200 Flanking Active TSS Muscle Satellite Cultured Cells --
28 chr15:99645000-99646200 Enhancers Placenta Placenta
29 chr15:99645000-99646400 Bivalent/Poised TSS Primary T regulatory cells fromperipheralblood blood
30 chr15:99645000-99646400 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
31 chr15:99645000-99646400 Active TSS HSMMtube muscle
32 chr15:99645000-99646600 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr15:99645000-99646600 Flanking Active TSS Primary hematopoietic stem cells blood
34 chr15:99645000-99646600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr15:99645000-99646600 Active TSS Skeletal Muscle Male skeletal muscle
36 chr15:99645000-99646600 Flanking Active TSS HMEC breast
37 chr15:99645000-99646600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
38 chr15:99645000-99646800 Flanking Bivalent TSS/Enh Thymus Thymus
39 chr15:99645000-99646800 Enhancers Spleen Spleen
40 chr15:99645000-99647000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr15:99645000-99647000 Active TSS Brain Cingulate Gyrus brain
42 chr15:99645000-99647400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr15:99645000-99647600 Active TSS Breast Myoepithelial Primary Cells Breast
44 chr15:99645000-99648000 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
45 chr15:99645000-99648200 Active TSS Right Atrium heart
46 chr15:99645000-99649600 Active TSS Rectal Smooth Muscle rectum
47 chr15:99645200-99645400 Bivalent/Poised TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr15:99645200-99645400 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
49 chr15:99645200-99645400 Flanking Bivalent TSS/Enh Primary B cells from peripheral blood blood
50 chr15:99645200-99645400 Bivalent/Poised TSS Primary T cells effector/memory enriched fromperipheralblood blood

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