The 2.0 version of rSNPBase

Variant report

Variant rs34906460
Chromosome Location chr12:122495947-122495948
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:122462400-122500000 Weak transcription Hela-S3 cervix
2 chr12:122466200-122500800 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr12:122467800-122500000 Strong transcription Thymus Thymus
4 chr12:122467800-122500200 Strong transcription Dnd41 blood
5 chr12:122472000-122507200 Weak transcription Fetal Brain Male brain
6 chr12:122474000-122496800 Weak transcription HMEC breast
7 chr12:122474400-122496600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr12:122474400-122500600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:122475200-122501400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr12:122479400-122500600 Weak transcription Small Intestine intestine
11 chr12:122483600-122500200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr12:122488000-122500600 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr12:122489400-122498000 Weak transcription Right Atrium heart
14 chr12:122489600-122499800 Weak transcription HUVEC blood vessel
15 chr12:122491200-122500000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr12:122491800-122501000 Strong transcription Fetal Brain Female brain
17 chr12:122492400-122497400 Strong transcription K562 blood
18 chr12:122492400-122499400 Strong transcription Cortex derived primary cultured neurospheres brain
19 chr12:122492400-122500200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr12:122492400-122500400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr12:122492600-122497000 Weak transcription Fetal Heart heart
22 chr12:122492600-122497600 Weak transcription Ovary ovary
23 chr12:122492600-122498000 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr12:122492600-122498800 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr12:122492600-122499200 Strong transcription iPS-18 Cell Line embryonic stem cell
26 chr12:122492600-122499800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr12:122492600-122500000 Strong transcription NHEK skin
28 chr12:122492600-122500200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr12:122492600-122500200 Strong transcription Primary hematopoietic stem cells short term culture blood
30 chr12:122492600-122500400 Strong transcription Primary T cells from cord blood blood
31 chr12:122492600-122500600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr12:122492600-122500600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr12:122492600-122505600 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr12:122492800-122496800 Weak transcription Placenta Placenta
35 chr12:122492800-122497000 Weak transcription Duodenum Mucosa Duodenum
36 chr12:122492800-122497200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr12:122492800-122497600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr12:122492800-122498000 Strong transcription HUES6 Cell Line embryonic stem cell
39 chr12:122492800-122498400 Strong transcription HUES48 Cell Line embryonic stem cell
40 chr12:122492800-122498400 Strong transcription Primary hematopoietic stem cells blood
41 chr12:122492800-122498800 Strong transcription iPS-20b Cell Line embryonic stem cell
42 chr12:122492800-122498800 Strong transcription Brain Anterior Caudate brain
43 chr12:122492800-122499600 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr12:122492800-122499800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr12:122492800-122499800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr12:122492800-122499800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr12:122492800-122500000 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr12:122492800-122500200 Strong transcription Primary B cells from peripheral blood blood
49 chr12:122492800-122500200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr12:122492800-122500400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015