Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:87982117..87985714-chr6:87986469..87990458,4	K562	blood:
2	chr6:87984045..87985714-chr6:87988958..87991422,2	K562	blood:

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs62439538	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6910541	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9444487	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9450632	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758067	chr6:87817883-87992957	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv2759453	chr6:87817883-87992957	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	esv2752763	chr6:87981595-88001064	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:87966400-87989200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:87967800-87989000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr6:87968200-87991200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr6:87970000-87984600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr6:87970200-87984600	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr6:87970600-87988800	Weak transcription	Fetal Thymus	thymus
7	chr6:87970600-87994800	Weak transcription	Fetal Brain Female	brain
8	chr6:87971200-87985800	Weak transcription	Brain Germinal Matrix	brain
9	chr6:87983400-87984800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr6:87984200-87984800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr6:87984200-87984800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr6:87984200-87984800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr6:87984200-87984800	Enhancers	Right Atrium	heart
14	chr6:87984200-87984800	Enhancers	Osteobl	bone
15	chr6:87984200-87985000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr6:87984400-87984800	Enhancers	NH-A	brain
17	chr6:87984400-87984800	Enhancers	NHDF-Ad	bronchial
18	chr6:87984400-87984800	Enhancers	NHLF	lung
19	chr6:87984400-87985000	Enhancers	Colon Smooth Muscle	Colon
20	chr6:87984400-87985600	Weak transcription	Primary neutrophils fromperipheralblood	blood

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