Variant report

Variant	rs35055340
Chromosome Location	chr1:165314063-165314064
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12737755	1.00[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs12748775	0.85[ASN][1000 genomes]
rs1506949	1.00[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs17428424	0.92[ASN][1000 genomes]
rs34913941	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs35315440	0.89[ASN][1000 genomes]
rs35437125	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs35453005	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs35537661	1.00[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs35664932	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4147087	0.89[ASN][1000 genomes]
rs71628375	1.00[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs71628376	1.00[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs875821	0.88[ASN][1000 genomes]
rs875822	0.88[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165311400-165318800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr1:165313400-165314200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:165313400-165314800	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr1:165313400-165315000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr1:165313400-165315000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr1:165313400-165315000	Bivalent Enhancer	Fetal Muscle Leg	muscle
7	chr1:165313600-165314800	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr1:165313600-165316800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr1:165313800-165314200	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr1:165313800-165314400	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr1:165313800-165314600	Enhancers	H1 Cell Line	embryonic stem cell
12	chr1:165313800-165314600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
13	chr1:165314000-165314200	Bivalent Enhancer	Right Atrium	heart
14	chr1:165314000-165314800	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr1:165314000-165314800	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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