Variant report

Variant	rs35074599
Chromosome Location	chr12:118063221-118063222
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10500105	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13307715	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1346368	0.88[ASN][1000 genomes]
rs1427577	0.88[ASN][1000 genomes]
rs1427578	0.88[ASN][1000 genomes]
rs1427581	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17331251	0.88[ASN][1000 genomes]
rs17390435	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1834827	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28667732	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34184477	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34330657	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34574207	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35038175	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35275809	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35552657	0.82[ASN][1000 genomes]
rs35573480	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs36103965	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61518741	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62481756	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6467001	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6467002	0.85[ASN][1000 genomes]
rs6948950	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6958411	0.88[ASN][1000 genomes]
rs6964687	0.88[ASN][1000 genomes]
rs6970401	0.88[ASN][1000 genomes]
rs6973477	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6973838	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7780337	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7787379	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7795867	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7804055	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9691923	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9692521	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832527	chr12:117974007-118110244	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118061000-118075000	Weak transcription	HUVEC	blood vessel

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