Variant report

Variant	rs35099169
Chromosome Location	chr4:20045967-20045968
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs17529705	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529290	chr4:19658583-20173839	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv593790	chr4:19740879-20142039	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2752044	chr4:19788263-20126804	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20043600-20046400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr4:20044200-20046000	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr4:20045000-20046600	Enhancers	HUVEC	blood vessel
4	chr4:20045200-20046800	Enhancers	Fetal Lung	lung
5	chr4:20045400-20046800	Enhancers	NHDF-Ad	bronchial
6	chr4:20045400-20047600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr4:20045600-20046000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr4:20045600-20046000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr4:20045600-20046000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr4:20045600-20046000	Enhancers	Fetal Stomach	stomach
11	chr4:20045600-20046400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr4:20045600-20046400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr4:20045600-20046600	Enhancers	Osteobl	bone
14	chr4:20045600-20046800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr4:20045600-20048000	Enhancers	Hela-S3	cervix
16	chr4:20045600-20049000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr4:20045800-20046000	Enhancers	Brain Germinal Matrix	brain
18	chr4:20045800-20046200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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