Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs13160499	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13165155	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17717956	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17717968	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17774569	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17774587	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17774641	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1864995	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1864996	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1960751	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1960752	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34157651	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34403399	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34526961	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34733654	0.83[EUR][1000 genomes]
rs35381042	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35685037	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35705709	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71580461	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73267103	0.83[EUR][1000 genomes]
rs7724336	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3334831	chr5:147165950-147339765	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv1028477	chr5:147255013-147416217	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:147307200-147314200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr5:147308200-147312200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr5:147309600-147311600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr5:147309800-147311400	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr5:147310800-147311800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr5:147310800-147311800	Weak transcription	Aorta	Aorta

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