Variant report

Variant	rs35261043
Chromosome Location	chr7:105338180-105338181
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:105336963..105338472-chr7:105345380..105347416,2	K562	blood:
2	chr7:105336972..105340159-chr7:105343977..105346880,3	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12705321	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13228177	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2010408	1.00[AFR][1000 genomes]
rs2075114	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34803070	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35865193	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv528739	chr7:105318058-105346117	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105330400-105352200	Weak transcription	Gastric	stomach
2	chr7:105331600-105340600	Weak transcription	Spleen	Spleen
3	chr7:105331800-105338600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr7:105332200-105353200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr7:105332600-105339200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr7:105332600-105347600	Weak transcription	Ovary	ovary
7	chr7:105332600-105348000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr7:105332600-105348400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr7:105332600-105352200	Weak transcription	Aorta	Aorta
10	chr7:105332800-105343800	Weak transcription	Brain Cingulate Gyrus	brain
11	chr7:105332800-105343800	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr7:105332800-105344000	Weak transcription	Brain Anterior Caudate	brain
13	chr7:105332800-105344000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr7:105332800-105344000	Weak transcription	NHDF-Ad	bronchial
15	chr7:105332800-105347000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr7:105332800-105347000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr7:105332800-105347000	Weak transcription	Fetal Lung	lung
18	chr7:105332800-105347600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr7:105332800-105347800	Weak transcription	Colon Smooth Muscle	Colon
20	chr7:105332800-105347800	Weak transcription	Pancreas	Pancrea
21	chr7:105332800-105347800	Weak transcription	Rectal Mucosa Donor 29	rectum
22	chr7:105332800-105348200	Weak transcription	Fetal Heart	heart
23	chr7:105332800-105348200	Weak transcription	Rectal Smooth Muscle	rectum
24	chr7:105332800-105348400	Weak transcription	Adipose Nuclei	Adipose
25	chr7:105332800-105348400	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr7:105332800-105349800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr7:105332800-105350200	Weak transcription	Cortex derived primary cultured neurospheres	brain
28	chr7:105332800-105351400	Weak transcription	Duodenum Mucosa	Duodenum
29	chr7:105332800-105351600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr7:105332800-105352000	Weak transcription	Colonic Mucosa	Colon
31	chr7:105333000-105350400	Weak transcription	Fetal Brain Female	brain
32	chr7:105333400-105338400	Weak transcription	Placenta	Placenta
33	chr7:105333400-105346000	Weak transcription	Right Atrium	heart
34	chr7:105333400-105347800	Weak transcription	Primary T cells from cord blood	blood
35	chr7:105333400-105348000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
36	chr7:105333600-105348000	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr7:105334400-105347400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
38	chr7:105334600-105347800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
39	chr7:105334600-105347800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
40	chr7:105334600-105348000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr7:105334800-105347400	Weak transcription	Primary T cells fromperipheralblood	blood
42	chr7:105336000-105339200	Enhancers	H1 Cell Line	embryonic stem cell
43	chr7:105336800-105338400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr7:105336800-105338400	Weak transcription	Fetal Stomach	stomach
45	chr7:105336800-105346000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr7:105336800-105347600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr7:105336800-105347800	Weak transcription	Monocytes-CD14+_RO01746	blood
48	chr7:105336800-105348400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr7:105337000-105338400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr7:105337000-105338400	Weak transcription	Fetal Intestine Large	intestine

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