Variant report

Variant	rs35271745
Chromosome Location	chr7:128118187-128118188
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3)
CpG islands
(count:0)
Chromatin interactive
region (count:4)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HEY1	chr7:128117930-128118248	K562	blood:	n/a	n/a
2	POLR2A	chr7:128117833-128118243	H1-hESC	embryonic stem cell:	n/a	n/a
3	POLR2A	chr7:128117962-128118361	GM12878	blood:	n/a	n/a

No data

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:128094286..128097516-chr7:128115288..128118444,4	K562	blood:
2	chr7:128116092..128118343-chr7:128171049..128172892,4	K562	blood:
3	chr7:128116465..128119803-chr7:128169321..128173196,4	MCF-7	breast:
4	chr7:128117849..128119350-chr7:128175808..128177783,2	K562	blood:

No data

Variant related genes	Relation type
METTL2B	TF binding region
ENSG00000273184	Chromatin interaction
ENSG00000273270	Chromatin interaction
ENSG00000135245	Chromatin interaction
ENSG00000240758	Chromatin interaction
ENSG00000242588	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2402929	0.98[MKK][hapmap]
rs6967393	1.00[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831124	chr7:127970345-128147910	Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
2	nsv966883	chr7:128107081-128142581	Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:128116200-128118200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr7:128116400-128118200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:128116600-128118200	Active TSS	HMEC	breast
4	chr7:128117200-128120600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr7:128117400-128118200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:128117400-128119800	Weak transcription	Lung	lung
7	chr7:128117400-128121200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr7:128117400-128136000	Weak transcription	Aorta	Aorta
9	chr7:128117600-128118200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
10	chr7:128117600-128118200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr7:128117600-128118200	Flanking Active TSS	NHEK	skin
12	chr7:128117600-128118400	Flanking Active TSS	Dnd41	blood
13	chr7:128117600-128119000	Weak transcription	Fetal Muscle Trunk	muscle
14	chr7:128117600-128121000	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr7:128117600-128128400	Weak transcription	Left Ventricle	heart
16	chr7:128117600-128134000	Weak transcription	Ovary	ovary
17	chr7:128117600-128135800	Weak transcription	Esophagus	oesophagus
18	chr7:128117800-128118200	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr7:128117800-128118200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr7:128117800-128118200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr7:128117800-128118200	Enhancers	Liver	Liver
22	chr7:128117800-128118400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
23	chr7:128117800-128118400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
24	chr7:128117800-128118400	Active TSS	Fetal Brain Female	brain
25	chr7:128117800-128118600	Enhancers	Primary T cells fromperipheralblood	blood
26	chr7:128117800-128118600	Enhancers	Fetal Intestine Small	intestine
27	chr7:128117800-128119000	Weak transcription	Fetal Muscle Leg	muscle
28	chr7:128117800-128119000	Weak transcription	Fetal Thymus	thymus
29	chr7:128117800-128119200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr7:128117800-128119200	Weak transcription	Primary B cells from peripheral blood	blood
31	chr7:128117800-128119200	Weak transcription	Placenta	Placenta
32	chr7:128117800-128119400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
33	chr7:128117800-128119400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
34	chr7:128117800-128119400	Weak transcription	Primary monocytes fromperipheralblood	blood
35	chr7:128117800-128119800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr7:128117800-128120400	Weak transcription	Stomach Smooth Muscle	stomach
37	chr7:128117800-128121000	Weak transcription	H9 Cell Line	embryonic stem cell
38	chr7:128117800-128121000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
39	chr7:128117800-128121000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
40	chr7:128117800-128121200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr7:128117800-128121200	Weak transcription	Primary B cells from cord blood	blood
42	chr7:128117800-128121400	Weak transcription	Spleen	Spleen
43	chr7:128117800-128123200	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chr7:128117800-128128400	Weak transcription	Placenta Amnion	Placenta Amnion
45	chr7:128117800-128133600	Weak transcription	Primary neutrophils fromperipheralblood	blood
46	chr7:128117800-128133800	Weak transcription	Thymus	Thymus
47	chr7:128117800-128134600	Weak transcription	Gastric	stomach
48	chr7:128117800-128135800	Weak transcription	Colon Smooth Muscle	Colon
49	chr7:128117800-128136200	Weak transcription	Stomach Mucosa	stomach
50	chr7:128117800-128137200	Weak transcription	Brain Angular Gyrus	brain

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